# HG changeset patch
# User chrisw
# Date 1573714460 0
# Node ID 05bfd9cc70823300fc361294240b25e227a74884
# Parent  35b20f54c985e1a24af9251c6e6e2116ce5f2920
Uploaded

diff -r 35b20f54c985 -r 05bfd9cc7082 monorail.xml
--- a/monorail.xml	Thu Nov 14 06:23:21 2019 +0000
+++ b/monorail.xml	Thu Nov 14 06:54:20 2019 +0000
@@ -35,7 +35,8 @@
                         #end if
                     #end if
                     ref="$index_source.fields.path"
-                    exon_bed="$index_source.fields.exons_path"
+                    exon_bed="$index_source.fields.path/$index_source.fields.dbkey/gtf/exons.bed"
+                    genome="$index_source.fields.dbkey"
                     output="."
                     temp="./tmp"
     ]]></command>
diff -r 35b20f54c985 -r 05bfd9cc7082 tool_data_table_conf.xml.sample
--- a/tool_data_table_conf.xml.sample	Thu Nov 14 06:23:21 2019 +0000
+++ b/tool_data_table_conf.xml.sample	Thu Nov 14 06:54:20 2019 +0000
@@ -1,5 +1,5 @@
 <tables>
-    <table name="monorail_index" comment_char="#">
+    <table name="monorail_dummy_index" comment_char="#">
         <columns>value, dbkey, name, path</columns>
         <file path="tool-data/monorail_index.loc" />
     </table>