Mercurial > repos > chrisd > coverage_sampler

comparison coverage_sampler.xml @ 21:fad66d1d8bda draft

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planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 6645049c8b4587e078cf326ee955970d76cebc7f-dirty
author chrisd
date Wed, 29 Jun 2016 03:16:03 -0400
parents 2268b850b57a
children a286d65db469
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20:2268b850b57a 21:fad66d1d8bda
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70 **Options** 70 **Options**
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72 - min This parameter specifies the starting sample level for the program. For example, a min value
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73 - min This parameter specifies the starting sample level for the program. For example, a min value
74 of five tells the program to begin by taking five percent of alignments from the alignment file. 74 of five tells the program to begin by taking five percent of alignments from the alignment file.
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76 - max This parameter specifies the ending sample level for the program. 76 - max This parameter specifies the ending sample level for the program.
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78 - skip This parameter specifies the amount of levels to skip between min and max. For example, 78 - skip This parameter specifies the amount of levels to skip between min and max. For example,
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79 if you specify a min value of five, a max value of 100, and a skip value of five, then 80 if you specify a min value of five, a max value of 100, and a skip value of five, then
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80 you would be sampling alignments in intervals of five. 82 you would be sampling alignments in intervals of five.
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82 - t This parameter specifies a threshold value. Only genes having a gene fraction greater than 84 - t This parameter specifies a threshold value. Only genes having a gene fraction greater than
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83 this value are provided as output. 86 this value are provided as output.
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85 - samples This parameter specifies the amount of iterations you would like to sample at. For example, 88 - samples This parameter specifies the amount of iterations you would like to sample at. For example,
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86 a sample value of five would sample each level five times. 90 a sample value of five would sample each level five times.
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91 **Output** 94 **Output**
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