Mercurial > repos > chrisd > coverage_sampler

comparison coverage_sampler.xml @ 37:520bc487403d draft

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planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 660fc35f51cce194be9d5f050f7353b47ab23fd1-dirty
author chrisd
date Wed, 29 Jun 2016 04:21:24 -0400
parents f4ace4f007e2
children 98a7da79f8a8
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36:f4ace4f007e2 37:520bc487403d
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83 **Output** 83 **Output**
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85 Output of this program is a tab delimited text file with following: 85 A tab delimited text file with the following columns::
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87 Column Description 87 Level The sampling levels alignments were taken at
88 88 Iteration The iteration at each sample level
89 Level The sampling level alignments were taken at 89 Gene Id The reference name having a gene fraction greater than threshold
90 90 Gene Fraction The gene fraction for the current reference sequence (in percent)
91 Iteration The ith iteration of the current sampling level 91 Hits The amount of alignments associated with the reference sequence at the current sample level
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93 Gene Id The reference sequence having a gene fraction greater than threshold
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95 Gene Fraction The overall fraction of the gene that was covered from the sample of alignments
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97 Hits The amount of times that the reference sequence was seen from the sample of alignments
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101 **Development** 95 **Development**
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