Mercurial > repos > chemteam > mdanalysis_rdf
comparison dihedrals.py @ 1:935c49339c3b draft
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 9b44a37fc1a0c338693f54eaf52b582439ca9f0c
| author | chemteam |
|---|---|
| date | Thu, 20 Dec 2018 06:46:20 -0500 |
| parents | 24e220d91481 |
| children | fdc0c1615372 |
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| 0:24e220d91481 | 1:935c49339c3b |
|---|---|
| 6 | 6 |
| 7 import MDAnalysis as mda | 7 import MDAnalysis as mda |
| 8 from MDAnalysis.lib.distances import calc_dihedrals | 8 from MDAnalysis.lib.distances import calc_dihedrals |
| 9 | 9 |
| 10 import matplotlib | 10 import matplotlib |
| 11 matplotlib.use('Agg') # noqa | |
| 11 import matplotlib.pyplot as plt | 12 import matplotlib.pyplot as plt |
| 12 | 13 |
| 13 import numpy as np | 14 import numpy as np |
| 14 | |
| 15 matplotlib.use('Agg') | |
| 16 | 15 |
| 17 | 16 |
| 18 def parse_command_line(argv): | 17 def parse_command_line(argv): |
| 19 parser = argparse.ArgumentParser() | 18 parser = argparse.ArgumentParser() |
| 20 parser.add_argument('--idcd', help='input dcd') | 19 parser.add_argument('--idcd', help='input dcd') |
