comparison seqsero2.xml @ 3:62f8b9e226c2 draft default tip

planemo upload commit 9b152b4a900a8cd70df992da881c7e3fa00d4e4c-dirty
author charles_s_test
date Thu, 21 Dec 2017 11:06:32 -0500
parents 4108dddd7278
children
comparison
equal deleted inserted replaced
2:4108dddd7278 3:62f8b9e226c2
12 <command detect_errors="exit_code"><![CDATA[ 12 <command detect_errors="exit_code"><![CDATA[
13 13
14 ln -s $fastq1 sample_1.fastq; 14 ln -s $fastq1 sample_1.fastq;
15 ln -s $fastq2 sample_2.fastq; 15 ln -s $fastq2 sample_2.fastq;
16 16
17 #for $name in $collect_param.keys()# $f[$name] #end for# 17
18 18
19 $__tool_directory__/SeqSero2.py 19 $__tool_directory__/SeqSero2.py
20 -p $numofthr 20 -p $numofthr
21 -i sample_1.fastq sample_2.fastq 21 -i sample_1.fastq sample_2.fastq
22 -b $maptype; 22 -b $maptype;