Mercurial > repos > charles_s_test > seqsero2

diff libs/deletion_compare.py @ 7:3d6680af0bec draft

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planemo upload commit a4fb57231f274270afbfebd47f67df05babffa4a-dirty
author charles_s_test
date Mon, 27 Nov 2017 16:30:27 -0500
parents 38ad1130d077
children 53efef402c51
line wrap: on
line diff
--- a/libs/deletion_compare.py	Mon Nov 27 14:37:41 2017 -0500
+++ b/libs/deletion_compare.py	Mon Nov 27 16:30:27 2017 -0500
@@ -120,15 +120,15 @@
         O2_bigger+=1
     except:
       continue
-  print "$$$Genome:",sra_name
+  print("$$$Genome:",sra_name)
   if O9_bigger>O2_bigger:
-    print "$$$Typhimurium"
+    print("$$$Typhimurium")
   elif O9_bigger<O2_bigger:
-    print "$$$Typhimurium_O5-"
+    print("$$$Typhimurium_O5-")
   else:
-    print "$$$Typhimurium, even no 7 bases difference"
-  print "O-4 number is:",O9_bigger
-  print "O-4_5- number is:",O2_bigger
+    print("$$$Typhimurium, even no 7 bases difference")
+  print("O-4 number is:",O9_bigger)
+  print("O-4_5- number is:",O2_bigger)
   os.system("rm "+sam+"_title.txt")###01/28/2015
   os.system("rm "+sam+"_seq.txt")###01/28/2015
   os.system("rm "+sam+".fasta")###01/28/2015