Mercurial > repos > charles_s_test > seqsero2

diff libs/deletion_compare.py @ 2:0d65b71ff8df draft

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planemo upload commit 464b391afaa5819bc681452e85bea9d882730eb6
author charles_s_test
date Sun, 12 Nov 2017 02:27:32 -0500
parents 6895de35a263
children 38ad1130d077
line wrap: on
line diff
--- a/libs/deletion_compare.py	Fri Oct 27 17:47:00 2017 -0400
+++ b/libs/deletion_compare.py	Sun Nov 12 02:27:32 2017 -0500
@@ -5,8 +5,8 @@
 from Initial_functions import Uniq
 from Bio.Blast import NCBIXML
 
-BwaPath="/nfs/sw/apps/bwa/bwa-0.7.15/bwa"
-SamTlsPth="/nfs/sw/apps/samtools/samtools-1.3.1/bin/samtools"
+BwaPath="bwa"
+SamTlsPth="samtools"
 Makebltdb="/nfs/sw/apps/blast/ncbi-blast-2.6.0+/bin/makeblastdb"
 Blastnpth="/nfs/sw/apps/blast/ncbi-blast-2.6.0+/bin/blastn"