comparison libs/H_combination_output_analysis.py @ 7:3d6680af0bec draft

planemo upload commit a4fb57231f274270afbfebd47f67df05babffa4a-dirty

6:b6281a377a18

          score=fliC_sero[seroname]+fljB_sero[fljB_seroname]
          combination.append(name)
          combination_score.append(score)
  combinationlist=dict(zip(combination,combination_score))  #we can do the filteration here
  final_dict=sorted(combinationlist.iteritems(), key=lambda d:d[1], reverse = True)
  print "$$_H:Order:",final_dict
elif score>100 and fljB_score<100:
  print "$$_H:No fljB, only fliC, and its order:",First_Choice,Sec_Choice,Third_Choice
elif score<100 and fljB_score>100:
  print "$$_H:No fliC, only fljB, and its order:",fljB_First_Choice,fljB_Sec_Choice,fljB_Third_Choice
elif score==1 and fljB_score>100:
  print "$$_H:No fliC (file) existed, only fljB, and its order:",fljB_First_Choice,fljB_Sec_Choice,fljB_Third_Choice
elif score==1 and fljB_score<100:
  print "$$_H:No fliC (file) existed, and no fljB"
elif score>100 and fljB_score==1:
  print "$$_H:No fljB (file) existed, only fliC, and its order:",First_Choice,Sec_Choice,Third_Choice
elif score<100 and fljB_score==1:
  print "$$_H:No fljB (file) existed, and no fliC"
else:
  print "$$_H:No fliC and fljB"


'''
E_thresh=1e-10
hspbit=[]

7:3d6680af0bec

          score=fliC_sero[seroname]+fljB_sero[fljB_seroname]
          combination.append(name)
          combination_score.append(score)
  combinationlist=dict(zip(combination,combination_score))  #we can do the filteration here
  final_dict=sorted(combinationlist.iteritems(), key=lambda d:d[1], reverse = True)
  print("$$_H:Order:",final_dict)
elif score>100 and fljB_score<100:
  print("$$_H:No fljB, only fliC, and its order:",First_Choice,Sec_Choice,Third_Choice)
elif score<100 and fljB_score>100:
  print("$$_H:No fliC, only fljB, and its order:",fljB_First_Choice,fljB_Sec_Choice,fljB_Third_Choice)
elif score==1 and fljB_score>100:
  print("$$_H:No fliC (file) existed, only fljB, and its order:",fljB_First_Choice,fljB_Sec_Choice,fljB_Third_Choice)
elif score==1 and fljB_score<100:
  print("$$_H:No fliC (file) existed, and no fljB")
elif score>100 and fljB_score==1:
  print("$$_H:No fljB (file) existed, only fliC, and its order:",First_Choice,Sec_Choice,Third_Choice)
elif score<100 and fljB_score==1:
  print("$$_H:No fljB (file) existed, and no fliC")
else:
  print("$$_H:No fliC and fljB")


'''
E_thresh=1e-10
hspbit=[]