Mercurial > repos > charles_s_test > seqsero

diff libs/deletion_compare.py @ 2:381e1e7109fc draft default tip

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planemo upload commit 464b391afaa5819bc681452e85bea9d882730eb6-dirty
author charles_s_test
date Sun, 12 Nov 2017 02:26:17 -0500
parents 8db411fab3e1
children
line wrap: on
line diff
--- a/libs/deletion_compare.py	Fri Oct 27 17:22:36 2017 -0400
+++ b/libs/deletion_compare.py	Sun Nov 12 02:26:17 2017 -0500
@@ -5,8 +5,8 @@
 from Initial_functions import Uniq
 from Bio.Blast import NCBIXML
 
-BwaPath="/nfs/sw/apps/bwa/bwa-0.7.15/bwa"
-SamTlsPth="/nfs/sw/apps/samtools/samtools-1.3.1/bin/samtools"
+BwaPath="bwa"
+SamTlsPth="samtools"
 Makebltdb="/nfs/sw/apps/blast/ncbi-blast-2.6.0+/bin/makeblastdb"
 Blastnpth="/nfs/sw/apps/blast/ncbi-blast-2.6.0+/bin/blastn"