Mercurial > repos > charles_s_test > seqsero

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planemo upload commit 464b391afaa5819bc681452e85bea9d882730eb6-dirty
author charles_s_test
date Sun, 12 Nov 2017 02:26:17 -0500
parents 8db411fab3e1
children
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1 <!DOCTYPE html>
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2 <html>
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3 <head>
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4 <title>SeqSero Results</title>
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5 </head>
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6 <body>
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7 <body style="font-family:Helvetica;">
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8 <p style="font-size:10px">
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9 <table border=1>
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10 <tr>
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11 <td>Input Files</td>
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12 <td>O antigen prediction</td>
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13 <td>H1 antigen prediction(fliC)</td>
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14 <td>H2 antigen prediction(fljB)</td>
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15 <td>Predicted antigenic profile</td>
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16 <td>Predicted serotype(s)</td>
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17 </tr>
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18 <tr>
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19 <td>dataset_445_SRR6158764_1.fastq dataset_446_SRR6158764_2.fastq</td>
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20 <td>O-7</td>
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21 <td>y</td>
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22 <td>1,5</td>
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23 <td>7:y:1,5</td>
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24 <td>Bareilly</td>
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25 </tr>
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26 </table>
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27 <tr>
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28 <p>
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29 <td>dataset_445_SRR6158764_1.fastq dataset_446_SRR6158764_2.fastq<br></td>
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30 <td>The serotype(s) is/are the only serotype(s) with the indicated antigenic profile currently recognized in the Kauffmann White Scheme. New serotypes can emerge and the possibility exists that this antigenic profile may emerge in a different subspecies. Identification of strains to the subspecies level should accompany serotype determination; the same antigenic profile in different subspecies is considered different serotypes.</td>
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31 <td>check fastq id and make them in accordance with each other...please wait...</td>
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32 </p>
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33 </tr>
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34 </body>
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35 </html>