Mercurial > repos > cathywise > truststore_import
comparison TrustStoreGalaxyImport.py @ 24:7b1720b6acf2
remove extra files
author | Catherine Wise <catherine.wise@csiro.au> |
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date | Tue, 14 Jan 2014 15:49:55 +1100 |
parents | cf4cf95e6678 |
children | 20dc961b7949 |
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23:cf4cf95e6678 | 24:7b1720b6acf2 |
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1 import sys | 1 import sys |
2 import shutil | 2 import shutil |
3 import gzip | 3 import gzip |
4 import tempfile | 4 import tempfile |
5 import os | |
5 from py_ts import TrustStoreClient, ts_utils | 6 from py_ts import TrustStoreClient, ts_utils |
6 from galaxy.datatypes.checkers import * | 7 from galaxy.datatypes.checkers import * |
7 | 8 |
8 def printNice(elem, f, depth): | 9 def printNice(elem, f, depth): |
9 try: | 10 try: |
80 os.write(fd, chunk) | 81 os.write(fd, chunk) |
81 os.close(fd) | 82 os.close(fd) |
82 gzipped_file.close() | 83 gzipped_file.close() |
83 | 84 |
84 shutil.copy(uncompressed, outputFile) | 85 shutil.copy(uncompressed, outputFile) |
86 try: | |
87 os.remove(uncompressed) | |
88 except OSError: | |
89 pass | |
85 else: | 90 else: |
86 shutil.copy(download, outputFile) | 91 shutil.copy(download, outputFile) |
87 else: | 92 else: |
88 print "File not found" | 93 print "File not found" |
89 sys.exit(4) | 94 sys.exit(4) |