comparison TrustStoreGalaxyBrowse.py @ 33:c404b570013b

More verbose 2.
author Catherine Wise <catherine.wise@csiro.au>
date Mon, 18 May 2015 16:03:47 +1000
parents 20c1d4fa4084
children d25b82c3276f
comparison
equal deleted inserted replaced
32:20c1d4fa4084 33:c404b570013b
164 164
165 if root is not None: 165 if root is not None:
166 with open(metadata_path, 'wb') as metadata_file: 166 with open(metadata_path, 'wb') as metadata_file:
167 for path in paths: 167 for path in paths:
168 locations = utils.Navigation.files_at_path(root, path) 168 locations = utils.Navigation.files_at_path(root, path)
169 if not locations or locations == []:
170 print("Path not found: " + path)
171 print("In root: " + str(root))
172 else:
173 print("Downloading file..." + str(locations))
169 for location in locations: 174 for location in locations:
170 if not location:
171 print("Path not found: " + path)
172 continue
173 else:
174 print("Downloading file... " + location.name)
175 filename = "".join(c in SAFE_CHARS and c or '-' for c in location.name) 175 filename = "".join(c in SAFE_CHARS and c or '-' for c in location.name)
176 extension = os.path.splitext(filename)[1] 176 extension = os.path.splitext(filename)[1]
177 name = construct_multi_filename(hda_id, filename, extension) 177 name = construct_multi_filename(hda_id, filename, extension)
178 target_output_filename = None 178 target_output_filename = None
179 if first: 179 if first: