# HG changeset patch # User Wise, Catherine (Digital, Acton) # Date 1435205133 -36000 # Node ID fb915c3aefb26be4365de6d095173b2547b1e691 # Parent 4819fbb59766e594d250d5f0b5c63677303f2917 .fa => fasta diff -r 4819fbb59766 -r fb915c3aefb2 TrustStoreGalaxyBrowse.py --- a/TrustStoreGalaxyBrowse.py Thu Jun 25 13:18:03 2015 +1000 +++ b/TrustStoreGalaxyBrowse.py Thu Jun 25 14:05:33 2015 +1000 @@ -96,12 +96,15 @@ filename = "%s_%s_%s_%s_%s" % ('primary', id, name, 'visible', file_type) return filename -def metadata_to_json(dataset_id, filename, name, extesion, ds_type='dataset', primary=False): +def metadata_to_json(dataset_id, filename, name, extension, ds_type='dataset', primary=False): """ Return line separated JSON From https://github.com/mdshw5/galaxy-json-data-source/blob/master/json_data_source.py """ + ext = extension + if ext == 'fa': + ext = 'fasta' meta_dict = dict(type=ds_type, - ext=extesion, + ext=extension, filename=filename, name=name, metadata={})