Mercurial > repos > cathywise > truststore_browse
diff TrustStoreGalaxyBrowse.py @ 3:34bdad74ec64
Fix json output again.
author | Catherine Wise <catherine.wise@csiro.au> |
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date | Fri, 22 May 2015 08:27:55 +1000 |
parents | 3ff3e9b8794f |
children | 2ca750b9083c |
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--- a/TrustStoreGalaxyBrowse.py Thu May 21 14:21:03 2015 +1000 +++ b/TrustStoreGalaxyBrowse.py Fri May 22 08:27:55 2015 +1000 @@ -173,16 +173,16 @@ print("Downloading file..." + ", ".join([loc.name for loc in locations])) for location in locations: filename = "".join(c in SAFE_CHARS and c or '-' for c in location.name) - extension = os.path.splitext(filename)[1] + extension = os.path.splitext(filename)[1].strip(".") name = construct_multi_filename(hda_id, filename, extension) target_output_filename = None - data_type = "dataset" + data_type = "new_primary_dataset" if first: target_output_filename = file_name dataset = "new_primary_dataset" first = False else: - target_output_filename = os.path.normpath("/".join([extra_files_path, name])) + target_output_filename = os.path.normpath(os.path.join(extra_files_path, name)) metadata_file.write( metadata_to_json(dataset_id, target_output_filename, name, extension, data_type)) download = truststore.getFile(store, location)