# HG changeset patch
# User bzonnedda
# Date 1487675007 18000
# Node ID 09ef072c40705d87fecda51cc052f0c307529d88
# Parent  dd24e1e47bbb4e6ba89ab7c0492e16f048987c61
Uploaded

diff -r dd24e1e47bbb -r 09ef072c4070 c_calls.xml
--- a/c_calls.xml	Mon Feb 20 06:57:07 2017 -0500
+++ b/c_calls.xml	Tue Feb 21 06:03:27 2017 -0500
@@ -1,7 +1,7 @@
 <tool id="conifer_call" name="CoNIFER CNVs caller" version="1.0">
   <description></description>
-  <command interpreter="python">
-       conifer.py call
+  <command>
+       python \$CONIFER_PATH/conifer.py call
 	--input $input
 	--output temporary
     --threshold $threshold