Mercurial > repos > brenninc > test_r_cairo_oct1_2015
diff tool_dependencies.xml @ 0:d03274c7c546 draft
Uploaded
author | brenninc |
---|---|
date | Thu, 01 Oct 2015 05:23:19 -0400 |
parents | |
children | 110f8e93a946 |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Thu Oct 01 05:23:19 2015 -0400 @@ -0,0 +1,74 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="R" version="3.1.2"> + <repository toolshed="http://l-unxx4770.it.manchester.ac.uk:9009/" name="package_r_3_1_2" owner="brenninc" changeset_revision="6c7b9b5dfcae" prior_installation_required="True" /> + </package> + <package name="R_extend_level_one" version="0.0.1"> + <install version="1.0"> + <actions> + <action type="setup_r_environment"> + <repository changeset_revision="6c7b9b5dfcae" name="package_r_3_1_2" owner="brenninc" toolshed="http://l-unxx4770.it.manchester.ac.uk:9009/"> + <package name="R" version="3.1.2" /> + <!-- includes base, boot, + class, cluster, codetools, compiler, + datasets, + foreign, + graphics, grDevices, grid, + KernSmooth, + lattice, + MASS, Matrix, methods, mgcv, + nlme, nnet, + parallel, + rpart, + spatial, splines, stats, stats4, survival, + tcltk, tools, + utils--> + + </repository> + <!--No dependencies Not on https://bioarchive.galaxyproject.org --> + <package>https://cran.r-project.org/src/contrib/acepack_1.3-3.3.tar.gz</package> + <package>https://cran.r-project.org/src/contrib/colorspace_1.2-6.tar.gz</package> + <!-- Imports graphics + Suggests: KernSmooth, MASS, kernlab, mvtnorm, vcd, dichromat, tcltk--> + <package>https://cran.r-project.org/src/contrib/digest_0.6.8.tar.gz</package> + <package>https://cran.r-project.org/src/contrib/dichromat_2.0-0.tar.gz</package> + <!-- Depends stats --> + <package>https://cran.r-project.org/src/contrib/Formula_1.2-1.tar.gz</package> + <!-- Depends stats --> + <package>https://cran.r-project.org/src/contrib/gtable_0.1.2.tar.gz</package> + <!-- Depends grid + Suggests: testthat, plyr--> + <package>https://cran.r-project.org/src/contrib/labeling_0.3.tar.gz</package> + <package>https://cran.r-project.org/src/contrib/magrittr_1.5.tar.gz</package> + <!-- Suggests: testthat, knitr --> + <package>https://cran.r-project.org/src/contrib/proto_0.3-10.tar.gz</package> + <!-- Suggests: graph, Rgraphviz --> + <package>https://cran.r-project.org/src/contrib/Rcpp_0.12.0.tar.gz</package> + <!-- Imports: methods, utils + Suggests: RUnit, inline, rbenchmark, highlight, pkgKitten (≥ 0.1.2) --> + <package>https://cran.r-project.org/src/contrib/RColorBrewer_1.1-2.tar.gz</package> + <package>https://cran.r-project.org/src/contrib/rjson_0.2.15.tar.gz</package> + <package>https://cran.r-project.org/src/contrib/snow_0.3-13.tar.gz</package> + <!-- Depends: R (≥ 2.12.1), utils + Suggests: Rmpi, rpvm, rlecuyer, rsprng, nws --> + <package>https://cran.r-project.org/src/contrib/SparseM_1.7.tar.gz</package> + <!-- Depends: R (≥ 2.15), methods + Imports: graphics, stats, utils --> + <package>https://cran.r-project.org/src/contrib/stringi_0.5-5.tar.gz</package> + <!-- Depends: R (≥ 2.13.1) + Imports: tools, utils, stats --> + <package>https://cran.r-project.org/src/contrib/XML_3.98-1.3.tar.gz</package> + <!-- Depends: R (≥ 2.13.0), methods, utils + Suggests: bitops, RCurl --> + <package>https://cran.r-project.org/src/contrib/xtable_1.7-4.tar.gz</package> + <package>https://cran.r-project.org/src/contrib/stringr_1.0.0.tar.gz</package> + <!-- Depends: R (≥ 2.14) + Imports: stringi (≥ 0.4.1), magrittr + Suggests: testthat, knitr --> + </action> + </actions> + </install> + </package> +</tool_dependency> + +