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Hard coded test path. TEST!
author brenninc
date Tue, 01 Sep 2015 04:42:13 -0400
parents 77f3bd0e4153
children 5537f8f1b722
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<tool id="brenninc_r_test" name="r_test" version="0.1.beta">
  <requirements>
    <requirement type="package" version="3.2.1">R</requirement>
    <requirement type="package" version="0.0.2">R_cairo</requirement>
    <requirement type="package" version="1.12.14">cairo</requirement>
    <requirement type="package" version="0.32.4">pixman</requirement>    
    <requirement type="package" version="1.6.7">libpng</requirement>    
    <requirement type="package" version="2.5.2">freetype</requirement>    
  </requirements>  
  <description>Lists packages installed into R</description>
  <stdio>
        <exit_code range="1" level="fatal" description="Error code 1 occurred" />
        <exit_code range="2:255" level="fatal" description="Unknown error occurred" />
  </stdio>
  <command   interpreter="bash">
    r_info.sh $__tool_directory__/packages.R $packages
  </command>
  <outputs>
    <data format="txt" name="packages" label="R Session Info"/>
  </outputs>

  <tests>
  </tests>

  <help>
<![CDATA[
This is a verification tool to see exactly which R this galaxy server is using.

It will outout the R version info and the R packages installed.
    ]]>
  </help>

</tool>