Mercurial > repos > brenninc > data_manager_all_fasta_path
diff tool-data/all_fasta.loc.sample @ 0:4742a2bae718 draft default tip
Uploaded first version.
| author | brenninc |
|---|---|
| date | Tue, 22 Mar 2016 11:45:30 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/all_fasta.loc.sample Tue Mar 22 11:45:30 2016 -0400 @@ -0,0 +1,17 @@ +#This file lists the locations and dbkeys of all the fasta files + +#This file has the format (white space characters are TAB characters): +# +#<unique_build_id> <dbkey> <display_name> <file_path> +# +#So, all_fasta.loc could look something like this: +# +#apiMel3 apiMel3 Honeybee (Apis mellifera): apiMel3 /path/to/genome/apiMel3/apiMel3.fa +#hg19canon hg19 Human (Homo sapiens): hg19 Canonical /path/to/genome/hg19/hg19canon.fa +#hg19full hg19 Human (Homo sapiens): hg19 Full /path/to/genome/hg19/hg19full.fa +# +#Your all_fasta.loc file should contain an entry for each individual +#fasta file. So there will be multiple fasta files for each build, +#such as with hg19 above. +# +