Mercurial > repos > brenninc > data_manager_all_fasta_path
comparison tool-data/all_fasta.loc.sample @ 0:4742a2bae718 draft default tip
Uploaded first version.
| author | brenninc |
|---|---|
| date | Tue, 22 Mar 2016 11:45:30 -0400 |
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| -1:000000000000 | 0:4742a2bae718 |
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| 1 #This file lists the locations and dbkeys of all the fasta files | |
| 2 | |
| 3 #This file has the format (white space characters are TAB characters): | |
| 4 # | |
| 5 #<unique_build_id> <dbkey> <display_name> <file_path> | |
| 6 # | |
| 7 #So, all_fasta.loc could look something like this: | |
| 8 # | |
| 9 #apiMel3 apiMel3 Honeybee (Apis mellifera): apiMel3 /path/to/genome/apiMel3/apiMel3.fa | |
| 10 #hg19canon hg19 Human (Homo sapiens): hg19 Canonical /path/to/genome/hg19/hg19canon.fa | |
| 11 #hg19full hg19 Human (Homo sapiens): hg19 Full /path/to/genome/hg19/hg19full.fa | |
| 12 # | |
| 13 #Your all_fasta.loc file should contain an entry for each individual | |
| 14 #fasta file. So there will be multiple fasta files for each build, | |
| 15 #such as with hg19 above. | |
| 16 # | |
| 17 |
