# HG changeset patch
# User boris
# Date 1370546830 14400
# Node ID 5df622f8147b3967a76e77fe4e848aeb926f882c
# Parent  66a948a7792e9f576862bec123367e5ca0f8b8ab
Deleted selected files

diff -r 66a948a7792e -r 5df622f8147b tool_dependencies.xml
--- a/tool_dependencies.xml	Thu Jun 06 09:36:36 2013 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,25 +0,0 @@
-<tool_dependency>
-    <package name="R" version="2.15.0">
-        <repository changeset_revision="562ebf52a8fe" name="package_r_2_15" owner="boris" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/"/>
-    </package>
-    <package name="ape" version="3.0-8">
-        <install version="1.0">
-            <actions>
-                <action type="download_by_url">http://cran.r-project.org/src/contrib/ape_3.0-8.tar.gz</action>
-                <action type="set_environment_for_install">
-                    <repository changeset_revision="562ebf52a8fe" name="package_r_2_15" owner="boris" toolshed="http://testtoolshed.g2.bx.psu.edu/">
-                        <package name="R" version="2.15.0"/>
-                    </repository>
-                </action>
-                <action type="make_directory">$INSTALL_DIR</action>
-                <action type="shell_command">R CMD INSTALL ape_3.0-8.tar.gz -l $INSTALL_DIR </action>
-                <action type="set_environment">
-                <environment_variable name="R_HOME" action="set_to">$ENV[R_HOME]</environment_variable>
-                <environment_variable name="R_LIBS" action="set_to">$ENV[R_LIBS]</environment_variable>
-                <environment_variable name="R_LIBS" action="prepend_to">$INSTALL_DIR</environment_variable>
-                </action>
-            </actions>
-        </install>
-        <readme> ape provides functions for reading, writing, plotting, and manipulating phylogenetic trees</readme>
-    </package>
-</tool_dependency>
\ No newline at end of file