# HG changeset patch
# User Daniel Blankenberg <dan@bx.psu.edu>
# Date 1368550252 14400
# Node ID 3b4a96996e8f9ef5877b97cd153ee831f886bdfc
# Parent  03f1db7f814df3df73d16673e65c540f37d787ca
Have hg clone command explicitly declare the checkout directory.

diff -r 03f1db7f814d -r 3b4a96996e8f tool_dependencies.xml
--- a/tool_dependencies.xml	Tue May 14 10:10:59 2013 -0400
+++ b/tool_dependencies.xml	Tue May 14 12:50:52 2013 -0400
@@ -3,7 +3,7 @@
     <package name="pyBamTools" version="0.0.1">
         <install version="1.0">
             <actions>
-                <action type="shell_command">hg clone -r 882432f4c0c1b2b3522aa9b69f3aa68b28e1f0c0 https://bitbucket.org/dan/pybamtools</action>
+                <action type="shell_command">hg clone -r 882432f4c0c1b2b3522aa9b69f3aa68b28e1f0c0 https://bitbucket.org/dan/pybamtools pyBamTools</action>
                 <action type="make_directory">$INSTALL_DIR/lib/python</action>
                 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action> 
                 <action type="set_environment">