Mercurial > repos > blankenberg > data_manager_bwa_index_builder
annotate tool_data_table_conf.xml.sample @ 2:fe6508204acc default tip
Add abspath value translation to data_manager_conf.xml.
author | Daniel Blankenberg <dan@bx.psu.edu> |
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date | Tue, 04 Jun 2013 14:57:17 -0400 |
parents | 11e84434ae70 |
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Create bwa indexer data manager.
Daniel Blankenberg <dan@bx.psu.edu>
parents:
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1 <tables> |
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Create bwa indexer data manager.
Daniel Blankenberg <dan@bx.psu.edu>
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2 <!-- Locations of all fasta files under genome directory --> |
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Daniel Blankenberg <dan@bx.psu.edu>
parents:
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3 <table name="all_fasta" comment_char="#"> |
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Daniel Blankenberg <dan@bx.psu.edu>
parents:
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4 <columns>value, dbkey, name, path</columns> |
11e84434ae70
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Daniel Blankenberg <dan@bx.psu.edu>
parents:
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5 <file path="tool-data/all_fasta.loc" /> |
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Daniel Blankenberg <dan@bx.psu.edu>
parents:
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6 </table> |
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parents:
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7 <!-- Locations of indexes in the BWA mapper format --> |
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Daniel Blankenberg <dan@bx.psu.edu>
parents:
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8 <table name="bwa_indexes" comment_char="#"> |
11e84434ae70
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Daniel Blankenberg <dan@bx.psu.edu>
parents:
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9 <columns>value, dbkey, name, path</columns> |
11e84434ae70
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Daniel Blankenberg <dan@bx.psu.edu>
parents:
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10 <file path="tool-data/bwa_index.loc" /> |
11e84434ae70
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Daniel Blankenberg <dan@bx.psu.edu>
parents:
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11 </table> |
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Daniel Blankenberg <dan@bx.psu.edu>
parents:
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12 <!-- Locations of indexes in the BWA color-space mapper format --> |
11e84434ae70
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Daniel Blankenberg <dan@bx.psu.edu>
parents:
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13 <table name="bwa_indexes_color" comment_char="#"> |
11e84434ae70
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Daniel Blankenberg <dan@bx.psu.edu>
parents:
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14 <columns>value, dbkey, name, path</columns> |
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Daniel Blankenberg <dan@bx.psu.edu>
parents:
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15 <file path="tool-data/bwa_index_color.loc" /> |
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Daniel Blankenberg <dan@bx.psu.edu>
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16 </table> |
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parents:
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17 </tables> |