Mercurial > repos > biopython > package_biopython_1_62
comparison tool_dependencies.xml @ 1:6b6a336db91a draft
planemo upload for repository https://github.com/biopython/galaxy_packages/tree/master/package_biopython_1_62 commit 985e29ac10e02dd97a3e155d881513658448e85a
| author | peterjc |
|---|---|
| date | Thu, 22 Oct 2015 06:00:01 -0400 |
| parents | ac9cc2992b69 |
| children | 76434ffd927d |
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| 0:ac9cc2992b69 | 1:6b6a336db91a |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <package name="numpy" version="1.7.1"> | 3 <package name="numpy" version="1.7.1"> |
| 4 <repository changeset_revision="b7ff4a8c58df" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" /> | 4 <repository changeset_revision="5c489d2d630b" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> |
| 5 </package> | 5 </package> |
| 6 <package name="biopython" version="1.62"> | 6 <package name="biopython" version="1.62"> |
| 7 <readme> | 7 <readme> |
| 8 This Galaxy Tool Shed package installs Biopython from source, having | 8 This Galaxy Tool Shed package installs Biopython from source, having |
| 9 first installed NumPy which is a build time depencency. This requires | 9 first installed NumPy which is a build time depencency. This requires |
| 17 </readme> | 17 </readme> |
| 18 <install version="1.0"> | 18 <install version="1.0"> |
| 19 <actions> | 19 <actions> |
| 20 <action type="download_by_url">https://pypi.python.org/packages/source/b/biopython/biopython-1.62.tar.gz</action> | 20 <action type="download_by_url">https://pypi.python.org/packages/source/b/biopython/biopython-1.62.tar.gz</action> |
| 21 <action type="set_environment_for_install"> | 21 <action type="set_environment_for_install"> |
| 22 <repository changeset_revision="b7ff4a8c58df" name="package_numpy_1_7" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu"> | 22 <repository changeset_revision="5c489d2d630b" name="package_numpy_1_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> |
| 23 <package name="numpy" version="1.7.1" /> | 23 <package name="numpy" version="1.7.1" /> |
| 24 </repository> | 24 </repository> |
| 25 </action> | 25 </action> |
| 26 <action type="make_directory">$INSTALL_DIR/lib/python</action> | 26 <action type="make_directory">$INSTALL_DIR/lib/python</action> |
| 27 <action type="shell_command"> | 27 <action type="shell_command"> |