# HG changeset patch
# User biomonika <biomonika@psu.edu>
# Date 1408992916 14400
# Node ID 7558fc0db1cfb71b1c4c52f1b190f4da27780421
# Parent  0659a0a8e6fdf014c6ce25c4cf02089aa45271a6
d6

diff -r 0659a0a8e6fd -r 7558fc0db1cf tool_dependencies.xml
--- a/tool_dependencies.xml	Mon Aug 25 14:50:27 2014 -0400
+++ b/tool_dependencies.xml	Mon Aug 25 14:55:16 2014 -0400
@@ -7,7 +7,6 @@
         <install version="1.0">
             <actions>
                 <action type="download_by_url">http://sourceforge.net/projects/samtools/files/samtools/0.1.19/samtools-0.1.19.tar.bz2</action>
-                <action type="shell_command">sed -i 's/O2/O2 -fPIC/‘ Makefile</action>
                 <action type="shell_command">make</action>
                 <action type="set_environment">
                     <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>