Mercurial > repos > biomonika > linkyx

view scripts/reformat_trinity_header.xml @ 1:38fbf97cfce2

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
new dependencies
author biomonika <biomonika@psu.edu>
date Tue, 02 Sep 2014 15:09:32 -0400
parents 1955f03f092e
children
line wrap: on
line source

<tool id="reformat_trinity_header" name="reformat_trinity_header">
      <description>Reformat Trinity header</description>
      <command interpreter="bash">reformat_trinity_header.sh $output $input1</command>
      <inputs>
        <param format="fasta" name="input1" type="data" label="Trinity.fasta"/>
      </inputs>
      <outputs>
        <data format="fasta" name="output" />
      </outputs>
  
     <tests>
       <test>
        <output name="out_file1" file="Trinity.fasta"/>
       </test>
     </tests>
   
     <help>
   Reformat Trinity header, keep only part until first space.
     </help>
   
   </tool>