# HG changeset patch # User bgruening # Date 1375462134 14400 # Node ID b716d69ac94ba2a2344c6a68fe28bc1d543c99bc # Parent ef436465bf165995801eaab2488d8056b0c11018 Uploaded diff -r ef436465bf16 -r b716d69ac94b tool_data_table_conf.xml.sample --- a/ tool_data_table_conf.xml.sample Fri Aug 02 12:43:55 2013 -0400 +++ b/ tool_data_table_conf.xml.sample Fri Aug 02 12:48:54 2013 -0400 @@ -1,3 +1,7 @@ <tables> - + <!-- Locations of 2bit sequence files for use in deepTools --> + <table name="deepTools_seqs" comment_char="#"> + <columns>value, name, path</columns> + <file path="tool-data/deepTools_seqs.loc" /> + </table> </tables> diff -r ef436465bf16 -r b716d69ac94b computeGCBias.xml --- a/computeGCBias.xml Fri Aug 02 12:43:55 2013 -0400 +++ b/computeGCBias.xml Fri Aug 02 12:48:54 2013 -0400 @@ -60,7 +60,7 @@ </param> <when value="cached"> <param name="input1_2bit" type="select" label="Using reference genome" help="If your genome of interest is not listed, contact the Galaxy team"> - <options from_data_table="lastz_seqs" /> + <options from_data_table="deepTools_seqs" /> </param> </when> <when value="history"> diff -r ef436465bf16 -r b716d69ac94b correctGCBias.xml --- a/correctGCBias.xml Fri Aug 02 12:43:55 2013 -0400 +++ b/correctGCBias.xml Fri Aug 02 12:48:54 2013 -0400 @@ -42,7 +42,7 @@ </param> <when value="cached"> <param name="input1_2bit" type="select" label="Using reference genome" help="If your genome of interest is not listed, contact your Galaxy team"> - <options from_data_table="lastz_seqs" /> + <options from_data_table="deepTools_seqs" /> </param> </when> <when value="history">