diff readme.rst @ 80:c4a3a8999945 draft

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+Galaxy wrapper using R and RPy2
+===============================
+
+These wrappers are based on RPy1 versions included in Galaxy-Main and
+ported by John Chilton to RPy2. Please see the following Mail from
+galaxy-dev:
+
+  http://lists.bx.psu.edu/pipermail/galaxy-dev/2013-May/014694.html
+
+Missing ports to RPy2:
+
+- rgenetics/rgQC.py
+- regVariation/rcve.py
+- ngs_simulation/ngs_simulation.py
+- metag_tools/short_reads_figure_high_quality_length.py
+- taxonomy/poisson2test.py
+
+ToDo:
+
+- add tool_dependencies.xml to RPy2 and R-3.0
+- testing
+- porting of missing tools
+
+
+============
+Installation
+============
+
+
+
+=======
+History
+=======
+
+
+  - v0.1: no release yet
+
+
+
+
+Wrapper Licence (MIT/BSD style)
+===============================
+
+Permission to use, copy, modify, and distribute this software and its
+documentation with or without modifications and for any purpose and
+without fee is hereby granted, provided that any copyright notices
+appear in all copies and that both those copyright notices and this
+permission notice appear in supporting documentation, and that the
+names of the contributors or copyright holders not be used in
+advertising or publicity pertaining to distribution of the software
+without specific prior permission.
+
+THE CONTRIBUTORS AND COPYRIGHT HOLDERS OF THIS SOFTWARE DISCLAIM ALL
+WARRANTIES WITH REGARD TO THIS SOFTWARE, INCLUDING ALL IMPLIED
+WARRANTIES OF MERCHANTABILITY AND FITNESS, IN NO EVENT SHALL THE
+CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY SPECIAL, INDIRECT
+OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS
+OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE
+OR OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE
+OR PERFORMANCE OF THIS SOFTWARE.
+