comparison recurring_lines.xml @ 28:e8b38ade9b3e draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/text_processing commit 7cdafed6c6a1387395e5a869186518f129aa3132

27:08cdbfffce67

<tool id="tp_text_file_with_recurring_lines" name="Create text file" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
    <description>with recurring lines</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="creator"/>

]]>
    </command>
    <inputs>
        <repeat name="token_set" title=" selection" min="1">
            <param name="line" type="text"
                label="Characters to insert" help="Specify the characters that will be inserted X times in every line"/>
            <conditional name="repeat_select">
                <param name="repeat_select_opts" type="select" label="Specify the number of iterations by">
                    <option value="file">File (for each line in file)</option>
                    <option value="user" selected="True">User defined number</option>
                </param>

                    <param name="times" value="10" />
                </conditional>
            </repeat>
            <output name="outfile" file="recurring_result2.txt" />
        </test>
    </tests>
    <help>
<![CDATA[
.. class:: infomark

28:e8b38ade9b3e

<tool id="tp_text_file_with_recurring_lines" name="Create text file" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@">
    <description>with recurring lines</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="creator"/>

]]>
    </command>
    <inputs>
        <repeat name="token_set" title=" selection" min="1">
            <param name="line" type="text"
                label="Characters to insert" help="Specify the characters that will be inserted X times in every line">
                    <sanitizer>
                        <valid initial="default">
                            <add value="&#9;" />  <!-- &#9; is the HTML entity for a tab -->
                        </valid>
                    </sanitizer>
            </param>
            <conditional name="repeat_select">
                <param name="repeat_select_opts" type="select" label="Specify the number of iterations by">
                    <option value="file">File (for each line in file)</option>
                    <option value="user" selected="True">User defined number</option>
                </param>

                    <param name="times" value="10" />
                </conditional>
            </repeat>
            <output name="outfile" file="recurring_result2.txt" />
        </test>
        <test>
            <repeat name="token_set">
                <param name="line" value="a&#9;b&#9;c&#9;d&#9;e&#9;f" />
                <conditional name="repeat_select">
                    <param name="repeat_select_opts" value="user" />
                    <param name="times" value="2" />
                </conditional>
            </repeat>
            <repeat name="token_set">
                <param name="line" value="2&#9;3&#9;4&#9;5&#9;6&#9;7" />
                <conditional name="repeat_select">
                    <param name="repeat_select_opts" value="user" />
                    <param name="times" value="1" />
                </conditional>
            </repeat>
            <repeat name="token_set">
                <param name="line" value="1&#9;2&#9;3&#9;4&#9;5&#9;6" />
                <conditional name="repeat_select">
                    <param name="repeat_select_opts" value="user" />
                    <param name="times" value="1" />
                </conditional>
            </repeat>
            <output name="outfile" file="sort_rows_results1.bed" />
        </test>
    </tests>
    <help>
<![CDATA[
.. class:: infomark