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comparison cat.xml @ 9:d9819ccb9ca7 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/text_processing commit 369e40078146d00608d52205bb8cee66ae735b76-dirty
author bgruening
date Tue, 30 Jun 2015 17:47:36 -0400
parents fa7f88da29d7
children c78b1767db2b
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8:fa7f88da29d7 9:d9819ccb9ca7
9 ]]> 9 ]]>
10 </version_command> 10 </version_command>
11 <command> 11 <command>
12 <![CDATA[ 12 <![CDATA[
13 cat 13 cat
14 #for $file in $inputs: 14 #echo ' '.join(['"%s"' % $file for $file in $inputs])#
15 "${file}" 15 #for $q in $queries:
16 #echo ' '.join(['"%s"' % $file for $file in $q.inputs2])#
16 #end for 17 #end for
17 > $out_file1 18 > $out_file1
18 ]]></command> 19 ]]></command>
19 <inputs> 20 <inputs>
20 <param name="inputs" multiple="true" type="data" format="txt" label="datasets to concatenate"/> 21 <param name="inputs" multiple="true" type="data" format="txt" label="Datasets to concatenate"/>
22 <repeat name="queries" title="Dataset">
23 <param name="inputs2" type="data" multiple="True" label="Select" />
24 </repeat>
21 </inputs> 25 </inputs>
22 <outputs> 26 <outputs>
23 <data name="out_file1" format_source="inputs" metadata_source="inputs"/> 27 <data name="out_file1" format_source="inputs" metadata_source="inputs"/>
24 </outputs> 28 </outputs>
25 <tests> 29 <tests>
26 <test> 30 <test>
27 <param name="inputs" value="sort_result1.bed,sort_result2.bed,sort_result3.bed"/> 31 <param name="inputs" value="sort_result1.bed,sort_result2.bed,sort_result3.bed"/>
28 <output name="out_file1" file="cat_result1.txt"/> 32 <output name="out_file1" file="cat_result1.txt"/>
33 </test>
34 <test>
35 <param name="inputs" value="sort_result1.bed,sort_result3.bed"/>
36 <repeat name="queries">
37 <param name="inputs2" value="sort_result3.bed,sort_result3.bed"/>
38 </repeat>
39 <repeat name="queries">
40 <param name="inputs2" value="sort_result3.bed"/>
41 </repeat>
42 <output name="out_file1" file="cat_result2.txt"/>
29 </test> 43 </test>
30 </tests> 44 </tests>
31 <help> 45 <help>
32 <![CDATA[ 46 <![CDATA[
33 47