Mercurial > repos > bgruening > text_processing
comparison cut.xml @ 7:d64eace4f9f3 draft
Uploaded
| author | bgruening |
|---|---|
| date | Sat, 17 Jan 2015 08:30:15 -0500 |
| parents | 8928e6d1e7ba |
| children | c78b1767db2b |
comparison
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| 6:8928e6d1e7ba | 7:d64eace4f9f3 |
|---|---|
| 114 <filter type="column_strip" column="0"/> <!-- get rid of all external whitespace --> | 114 <filter type="column_strip" column="0"/> <!-- get rid of all external whitespace --> |
| 115 <filter type="string_function" column="0" name="lower" /> | 115 <filter type="string_function" column="0" name="lower" /> |
| 116 <filter type="param_value" column="0" value="^c\d{1,}$" compare="re_search" keep="True"/> | 116 <filter type="param_value" column="0" value="^c\d{1,}$" compare="re_search" keep="True"/> |
| 117 <filter type="column_strip" column="0" strip="c"/> <!-- get rid of c's --> | 117 <filter type="column_strip" column="0" strip="c"/> <!-- get rid of c's --> |
| 118 <filter type="insert_column" value="1" iterate="True" column="0"/> | 118 <filter type="insert_column" value="1" iterate="True" column="0"/> |
| 119 <filter type="boolean" column="1" cast="int" /> | 119 <filter type="boolean" column="1" cast="int" /> |
| 120 <filter type="metadata_value" ref="input" name="chromCol" column="1" /> | 120 <filter type="metadata_value" ref="input" name="chromCol" column="1" /> |
| 121 </option> | 121 </option> |
| 122 </action> | 122 </action> |
| 123 | 123 |
| 124 <action type="metadata" name="startCol"> | 124 <action type="metadata" name="startCol"> |
| 125 <option type="from_param" name="list" column="0" offset="0"> <!-- startCol is 0--> | 125 <option type="from_param" name="list" column="0" offset="0"> <!-- startCol is 0--> |
| 126 <filter type="multiple_splitter" column="0" separator=","/> | 126 <filter type="multiple_splitter" column="0" separator=","/> |
| 127 <filter type="column_strip" column="0"/> <!-- get rid of all external whitespace --> | 127 <filter type="column_strip" column="0"/> <!-- get rid of all external whitespace --> |
| 128 <filter type="string_function" column="0" name="lower" /> | 128 <filter type="string_function" column="0" name="lower" /> |
| 131 <filter type="insert_column" value="1" iterate="True" column="0"/> | 131 <filter type="insert_column" value="1" iterate="True" column="0"/> |
| 132 <filter type="boolean" column="1" cast="int" /> | 132 <filter type="boolean" column="1" cast="int" /> |
| 133 <filter type="metadata_value" ref="input" name="startCol" column="1" /> | 133 <filter type="metadata_value" ref="input" name="startCol" column="1" /> |
| 134 </option> | 134 </option> |
| 135 </action> | 135 </action> |
| 136 | 136 |
| 137 <action type="metadata" name="endCol"> | 137 <action type="metadata" name="endCol"> |
| 138 <option type="from_param" name="list" column="0" offset="0"> <!-- endCol is 0--> | 138 <option type="from_param" name="list" column="0" offset="0"> <!-- endCol is 0--> |
| 139 <filter type="multiple_splitter" column="0" separator=","/> | 139 <filter type="multiple_splitter" column="0" separator=","/> |
| 140 <filter type="column_strip" column="0"/> <!-- get rid of all external whitespace --> | 140 <filter type="column_strip" column="0"/> <!-- get rid of all external whitespace --> |
| 141 <filter type="string_function" column="0" name="lower" /> | 141 <filter type="string_function" column="0" name="lower" /> |
| 144 <filter type="insert_column" value="1" iterate="True" column="0"/> | 144 <filter type="insert_column" value="1" iterate="True" column="0"/> |
| 145 <filter type="boolean" column="1" cast="int" /> | 145 <filter type="boolean" column="1" cast="int" /> |
| 146 <filter type="metadata_value" ref="input" name="endCol" column="1" /> | 146 <filter type="metadata_value" ref="input" name="endCol" column="1" /> |
| 147 </option> | 147 </option> |
| 148 </action> | 148 </action> |
| 149 | 149 |
| 150 <action type="metadata" name="nameCol" default="0"> | 150 <action type="metadata" name="nameCol" default="0"> |
| 151 <option type="from_param" name="list" column="0" offset="0"> <!-- nameCol is 0--> | 151 <option type="from_param" name="list" column="0" offset="0"> <!-- nameCol is 0--> |
| 152 <filter type="multiple_splitter" column="0" separator=","/> | 152 <filter type="multiple_splitter" column="0" separator=","/> |
| 153 <filter type="column_strip" column="0"/> <!-- get rid of all external whitespace --> | 153 <filter type="column_strip" column="0"/> <!-- get rid of all external whitespace --> |
| 154 <filter type="string_function" column="0" name="lower" /> | 154 <filter type="string_function" column="0" name="lower" /> |
| 157 <filter type="insert_column" value="1" iterate="True" column="0"/> | 157 <filter type="insert_column" value="1" iterate="True" column="0"/> |
| 158 <filter type="boolean" column="1" cast="int" /> | 158 <filter type="boolean" column="1" cast="int" /> |
| 159 <filter type="metadata_value" ref="input" name="nameCol" column="1" /> | 159 <filter type="metadata_value" ref="input" name="nameCol" column="1" /> |
| 160 </option> | 160 </option> |
| 161 </action> | 161 </action> |
| 162 | 162 |
| 163 <action type="metadata" name="strandCol" default="0"> | 163 <action type="metadata" name="strandCol" default="0"> |
| 164 <option type="from_param" name="list" column="0" offset="0"> <!-- strandCol is 0--> | 164 <option type="from_param" name="list" column="0" offset="0"> <!-- strandCol is 0--> |
| 165 <filter type="multiple_splitter" column="0" separator=","/> | 165 <filter type="multiple_splitter" column="0" separator=","/> |
| 166 <filter type="column_strip" column="0"/> <!-- get rid of all external whitespace --> | 166 <filter type="column_strip" column="0"/> <!-- get rid of all external whitespace --> |
| 167 <filter type="string_function" column="0" name="lower" /> | 167 <filter type="string_function" column="0" name="lower" /> |