comparison cut.xml @ 27:08cdbfffce67 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/text_processing commit 2dc2df988bd2dde9f8d7f629b594186dbd4fdc2b

26:f22a309187a3

<tool id="tp_cut_tool" name="Advanced Cut" version="@TOOL_VERSION@+galaxy2" profile="@PROFILE@">
    <description>columns from a table (cut)</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements" />

        </data>
    </outputs>
    <tests>
        <test expect_num_outputs="1">
            <param name="input" value="cut1.txt"/>
            <param name="list" value="1,3,4"/>
            <param name="delimiter" value=""/>
            <output name="output" file="cut_results1.txt"/>
            <assert_command>
                <has_text text="-f '1,3,4'"/>
            </assert_command>
        </test>

        <test expect_num_outputs="1">
            <param name="input" value="cut1.txt"/>
            <conditional name="cut_type_options">
                <param name="delimiter" value="" />
                <conditional name="colnames_option">

                <has_text text="-f '2'"/>
            </assert_command>
        </test>
        <test expect_num_outputs="1">
            <param name="input" value="cut1.txt"/>
            <param name="list" value="-3" />
            <param name="delimiter" value="" />
            <param name="cut_element" value="-c" />
            <output name="output" file="cut_results3.txt"/>
        </test>
    </tests>
    <help>
<![CDATA[

27:08cdbfffce67

<tool id="tp_cut_tool" name="Advanced Cut" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
    <description>columns from a table (cut)</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements" />

        </data>
    </outputs>
    <tests>
        <test expect_num_outputs="1">
            <param name="input" value="cut1.txt"/>
            <conditional name="cut_type_options">
                <param name="cut_element" value="-f"/>
                <param name="delimiter" value="" />
                 <conditional name="colnames_option">
                    <param name="header" value="Y"/>
                    <param name="list" value="1,3,4"/>
                </conditional>
            </conditional>
            <output name="output" file="cut_results1.txt"/>
            <assert_command>
                <has_text text="-f '1,3,4'"/>
            </assert_command>
        </test>
        <test expect_num_outputs="1">
            <param name="input" value="cut1.txt"/>
            <conditional name="cut_type_options">
                <param name="delimiter" value="" />
                <conditional name="colnames_option">

                <has_text text="-f '2'"/>
            </assert_command>
        </test>
        <test expect_num_outputs="1">
            <param name="input" value="cut1.txt"/>
            <conditional name="cut_type_options">
                <param name="cut_element" value="-c" />
                <param name="list" value="-3" />
            </conditional>
            <output name="output" file="cut_results3.txt"/>
        </test>
    </tests>
    <help>
<![CDATA[