Mercurial > repos > bgruening > test_repository_setup_python_environment

changeset 0:ee884828d257 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author bgruening
date Fri, 27 Jun 2014 19:49:51 -0400
parents
children 52962b810ccc
files tool_dependencies.xml
diffstat 1 files changed, 29 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Fri Jun 27 19:49:51 2014 -0400
@@ -0,0 +1,29 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="python" version="2.7">
+        <repository changeset_revision="d031f8824405" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="pysam" version="0.7.7">
+        <install version="1.0">
+            <actions>
+                <action type="setup_python_environment">
+                   <repository changeset_revision="d031f8824405" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                       <package name="python" version="2.7" />
+                   </repository>
+                    <!-- allow downloading and installing an Python package from https://pypi.org/ -->
+                    <package>pysam=0.7.6</package>
+                    <package>pysam</package>
+                    <package>https://pypi.python.org/packages/source/d/deepTools/deepTools-1.5.8.tar.gz</package>
+                </action>
+
+                <action type="set_environment">
+                    <environment_variable action="set_to" name="TEST_ENV_VAR">$INSTALL_DIR</environment_variable>
+                </action>
+
+            </actions>
+        </install>
+        <readme>
+            Test repository for easy installation of R packages.
+        </readme>
+    </package>
+</tool_dependency>