Mercurial > repos > bgruening > sklearn_build_pipeline
comparison pipeline.xml @ 4:9e189ce7d859 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 8cf3d813ec755166ee0bd517b4ecbbd4f84d4df1
author | bgruening |
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date | Thu, 23 Aug 2018 16:08:10 -0400 |
parents | ddd8c51b7302 |
children | 092b42170dd1 |
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3:ddd8c51b7302 | 4:9e189ce7d859 |
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18 <configfile name="sklearn_pipeline_script"> | 18 <configfile name="sklearn_pipeline_script"> |
19 <![CDATA[ | 19 <![CDATA[ |
20 import sys | 20 import sys |
21 import os | 21 import os |
22 import json | 22 import json |
23 import pickle | |
24 import pprint | 23 import pprint |
25 import skrebate | 24 import skrebate |
26 from sklearn import (preprocessing, svm, linear_model, ensemble, naive_bayes, | 25 from sklearn import (preprocessing, svm, linear_model, ensemble, naive_bayes, |
27 tree, neighbors, decomposition, kernel_approximation, cluster) | 26 tree, neighbors, decomposition, kernel_approximation, cluster) |
28 from sklearn.pipeline import Pipeline | 27 from sklearn.pipeline import Pipeline |
316 .. _`cluster.FeatureAgglomeration`: http://scikit-learn.org/stable/modules/generated/sklearn.cluster.FeatureAgglomeration.html | 315 .. _`cluster.FeatureAgglomeration`: http://scikit-learn.org/stable/modules/generated/sklearn.cluster.FeatureAgglomeration.html |
317 .. _`skrebate`: https://epistasislab.github.io/scikit-rebate/using/ | 316 .. _`skrebate`: https://epistasislab.github.io/scikit-rebate/using/ |
318 | 317 |
319 ]]> | 318 ]]> |
320 </help> | 319 </help> |
321 <expand macro="sklearn_citation"/> | 320 <expand macro="sklearn_citation"> |
321 <expand macro="skrebate_citation"/> | |
322 <expand macro="xgboost_citation"/> | |
323 </expand> | |
322 </tool> | 324 </tool> |