# HG changeset patch
# User bgruening
# Date 1498815891 14400
# Node ID aa4332ee7d1d5c71d2442cb70a9832aff20af8a5
# Parent  83bbe4e20bdc5e22ccb3eb0abfdceee2ab9b4ea5
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/salmon commit d7fae9d149b8b6aab2d01d94f137efc2967c7ee7

diff -r 83bbe4e20bdc -r aa4332ee7d1d salmon.xml
--- a/salmon.xml	Fri May 19 12:23:39 2017 -0400
+++ b/salmon.xml	Fri Jun 30 05:44:51 2017 -0400
@@ -234,7 +234,8 @@
             label="Perform fragment GC bias correction"
             help=""/>
         <param argument="--geneMap" type="data" format="tabular,gff,gtf" optional="True"
-            label="File containing a mapping of transcripts to genes.  If this file is provided Salmon will output both quant.sf and quant.genes.sf files, where the latter contains aggregated gene-level abundance estimates. The transcript to gene mapping should be provided as either a GTF file, or a in a simple tab-delimited format where each line contains the name of a transcript and the gene to which it belongs separated by a tab." />
+            label="File containing a mapping of transcripts to genes" 
+            help="If this file is provided Salmon will output both quant.sf and quant.genes.sf files, where the latter contains aggregated gene-level abundance estimates. The transcript to gene mapping should be provided as either a GTF file, or a in a simple tab-delimited format where each line contains the name of a transcript and the gene to which it belongs separated by a tab." />
         <section name="adv" title="Additional Options">
             <param argument="--writeMappings" type="boolean" truevalue="--writeMappings" falsevalue="" checked="False"
                 label="Write Mappings"