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view tool-data/salmon_indexes.loc.sample @ 6:aa4332ee7d1d draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/salmon commit d7fae9d149b8b6aab2d01d94f137efc2967c7ee7
author bgruening
date Fri, 30 Jun 2017 05:44:51 -0400
parents 1e987317bf3a
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# This is a sample file distributed with Galaxy that is used to define a
# list of salmon indices, using three columns tab separated:
#
# salmon_index_id{tab}Salmon Index desciption{tab}/data/salmon_indexes/salmon_index_id/
#
# An index can be created with the following command:
#
# salmon index
#     --transcripts your_transcripts.fasta
#     --kmerSize 21
#     --out /data/salmon_indexes/salmon_index_id/
#     --threads 4
#