Mercurial > repos > bgruening > salmon

view tool-data/salmon_indexes.loc.sample @ 3:0b689bf9473c draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/salmon commit f437f5e8c6c856c6f0bb8d8ea6e34f5441ee088f
author bgruening
date Thu, 02 Feb 2017 19:37:14 -0500
parents 1e987317bf3a
children
line wrap: on
line source

# This is a sample file distributed with Galaxy that is used to define a
# list of salmon indices, using three columns tab separated:
#
# salmon_index_id{tab}Salmon Index desciption{tab}/data/salmon_indexes/salmon_index_id/
#
# An index can be created with the following command:
#
# salmon index
#     --transcripts your_transcripts.fasta
#     --kmerSize 21
#     --out /data/salmon_indexes/salmon_index_id/
#     --threads 4
#