Mercurial > repos > bgruening > salmon
comparison test-data/cached_locally/prebuilt_index/quasi_index.log @ 12:2e3425b9f01d draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/salmon commit 06db9bd0914a60c3ddc0a1f77de0d6f731b56e02"
| author | bgruening |
|---|---|
| date | Mon, 09 Sep 2019 10:37:28 -0400 |
| parents | c320b539ff54 |
| children |
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| 11:c320b539ff54 | 12:2e3425b9f01d |
|---|---|
| 1 [2019-09-08 20:35:10.409] [jointLog] [info] [Step 1 of 4] : counting k-mers | |
| 2 [2019-09-08 20:35:10.412] [jointLog] [info] Replaced 0 non-ATCG nucleotides | |
| 3 [2019-09-08 20:35:10.412] [jointLog] [info] Clipped poly-A tails from 0 transcripts | |
| 4 [2019-09-08 20:35:10.412] [jointLog] [info] Building rank-select dictionary and saving to disk | |
| 5 [2019-09-08 20:35:10.412] [jointLog] [info] done | |
| 6 [2019-09-08 20:35:10.412] [jointLog] [info] Writing sequence data to file . . . | |
| 7 [2019-09-08 20:35:10.412] [jointLog] [info] done | |
| 8 [2019-09-08 20:35:10.412] [jointLog] [info] Building 32-bit suffix array (length of generalized text is 28,577) | |
| 9 [2019-09-08 20:35:10.413] [jointLog] [info] Building suffix array . . . | |
| 10 [2019-09-08 20:35:10.445] [jointLog] [info] khash had 18,902 keys | |
| 11 [2019-09-08 20:35:10.445] [jointLog] [info] saving hash to disk . . . | |
| 12 [2019-09-08 20:35:10.447] [jointLog] [info] done |