Mercurial > repos > bgruening > rnasnp
view test-data/seq2.txt @ 0:d8ac12e40158 draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rnasnp commit 6e51a331dbeab2786d8df5fd379ae3a63eb61d83
author | bgruening |
---|---|
date | Tue, 13 Dec 2016 10:44:36 -0500 |
parents | |
children |
line wrap: on
line source
>gi|5420376|emb|AJ238799.1| Hepatitis C virus type 1b complete genome, isolate Con1 GCCAGCCCCCGATTGGGGGCGACACTCCACCATAGATCACTCCCCTGTGAGGAACTACTGTCTTCACGCA GAAAGCGTCTAGCCATGGCGTTAGTATGAGTGTCGTGCAGCCTCCAGGACCCCCCCTCCCGGGAGAGCCA TAGTGGTCTGCGGAACCGGTGAGTACACCGGAATTGCCAGGACGACCGGGTCCTTTCTTGGATCAACCCG CTCAATGCCTGGAGATTTGGGCGTGCCCCCGCGAGACTGCTAGCCGAGTAGTGTTGGGTCGCGAAAGGCC TTGTGGTACTGCCTGATAGGGTGCTTGCGAGTGCCCCGGGAGGTCTCGTAGACCGTGCACCATGAGCACG AATCCTAAACCTCAAAGAAAAACCAAACGTAACACCAACCGCCGCCCACAGGACGTCAAGTTCCCGGGCG GTGGTCAGATCGTCGGTGGAGTTTACCTGTTGCCGCGCAGGGGCCCCAGGTTGGGTGTGCGCGCGACTAG GAAGACTTCCGAGCGGTCGCAACCTCGTGGAAGGCGACAACCTATCCCCAAGGCTCGCCAGCCCGAGGGT AGGGCCTGGGCTCAGCCCGGGTACCCCTGGCCCCTCTATGGCAATGAGGGCTTGGGGTGGGCAGGATGGC TCCTGTCACCCCGTGGCTCTCGGCCTAGTTGGGGCCCCACGGACCCCCGGCGTAGGTCGCGCAATTTGGG TAAGGTCATCGATACCCTCACGTGCGGCTTCGCCGATCTCATGGGGTACATTCCGCTCGTCGGCGCCCCC CTAGGGGGCGCTGCCAGGGCCCTGGCGCATGGCGTCCGGGTTCTGGAGGACGGCGTGAACTATGCAACAG GGAATCTGCCCGGTTGCTCCTTTTCTATCTTCCTTTTGGCTTTGCTGTCCTGTTTGACCATCCCAGCTTC CGCTTATGAAGTGCGCAACGTATCCGGAGTGTACCATGTCACGAACGACTGCTCCAACGCAAGCATTGTG TATGAGGCAGCGGACATGATCATGCATACCCCCGGGTGCGTGCCCTGCGTTCGGGAGAACAACTCCTCCC GCTGCTGGGTAGCGCTCACTCCCACGCTCGCGGCCAGGAACGCTAGCGTCCCCACTACGACGATACGACG CCATGTCGATTTGCTCGTTGGGGCGGCTGCTCTCTGCTCCGCTATGTACGTGGGAGATCTCTGCGGATCT GTTTTCCTCGTCGCCCAGCTGTTCACCTTCTCGCCTCGCCGGCACGAGACAGTACAGGACTGCAATTGCT CAATATATCCCGGCCACGTGACAGGTCACCGTATGGCTTGGGATATGATGATGAACTGGTCACCTACAGC AGCCCTAGTGGTATCGCAGTTACTCCGGATCCCACAAGCTGTCGTGGATATGGTGGCGGGGGCCCATTGG GGAGTCCTAGCGGGCCTTGCCTACTATTCCATGGTGGGGAACTGGGCTAAGGTTCTGATTGTGATGCTAC TCTTTGCCGGCGTTGACGGGGGAACCTATGTGACAGGGGGGACGATGGCCAAAAACACCCTCGGGATTAC GTCCCTCTTTTCACCCGGGTCATCCCAGAAAATCCAGCTTGTAAACACCAACGGCAGCTGGCACATCAAC AGGACTGCCCTGAACTGCAATGACTCCCTCAACACTGGGTTCCTTGCTGCGCTGTTCTACGTGCACAAGT TCAACTCATCTGGATGCCCAGAGCGCATGGCCAGCTGCAGCCCCATCGACGCGTTCGCTCAGGGGTGGGG GCCCATCACTTACAATGAGTCACACAGCTCGGACCAGAGGCCTTATTGTTGGCACTACGCACCCCGGCCG TGCGGTATCGTACCCGCGGCGCAGGTGTGTGGTCCAGTGTACTGCTTCACCCCAAGCCCTGTCGTGGTGG GGACGACCGACCGGTTCGGCGTCCCTACGTACAGTTGGGGGGAGAATGAGACGGACGTGCTGCTTCTTAA CAACACGCGGCCGCCGCAAGGCAACTGGTTTGGCTGTACATGGATGAATAGCACTGGGTTCACCAAGACG TGCGGGGGCCCCCCGTGTAACATCGGGGGGATCGGCAATAAAACCTTGACCTGCCCCACGGACTGCTTCC GGAAGCACCCCGAGGCCACTTACACCAAGTGTGGTTCGGGGCCTTGGTTGACACCCAGATGCTTGGTCCA CTACCCATACAGGCTTTGGCACTACCCCTGCACTGTCAACTTTACCATCTTCAAGGTTAGGATGTACGTG GGGGGAGTGGAGCACAGGCTCGAAGCCGCATGCAATTGGACTCGAGGAGAGCGTTGTAACCTGGAGGACA GGGACAGATCAGAGCTTAGCCCGCTGCTGCTGTCTACAACGGAGTGGCAGGTATTGCCCTGTTCCTTCAC CACCCTACCGGCTCTGTCCACTGGTTTGATCCATCTCCATCAGAACGTCGTGGACGTACAATACCTGTAC GGTATAGGGTCGGCGGTTGTCTCCTTTGCAATCAAATGGGAGTATGTCCTGTTGCTCTTCCTTCTTCTGG CGGACGCGCGCGTCTGTGCCTGCTTGTGGATGATGCTGCTGATAGCTCAAGCTGAGGCCGCCCTAGAGAA CCTGGTGGTCCTCAACGCGGCATCCGTGGCCGGGGCGCATGGCATTCTCTCCTTCCTCGTGTTCTTCTGT GCTGCCTGGTACATCAAGGGCAGGCTGGTCCCTGGGGCGGCATATGCCCTCTACGGCGTATGGCCGCTAC TCCTGCTCCTGCTGGCGTTACCACCACGAGCATACGCCATGGACCGGGAGATGGCAGCATCGTGCGGAGG CGCGGTTTTCGTAGGTCTGATACTCTTGACCTTGTCACCGCACTATAAGCTGTTCCTCGCTAGGCTCATA TGGTGGTTACAATATTTTATCACCAGGGCCGAGGCACACTTGCAAGTGTGGATCCCCCCCCTCAACGTTC GGGGGGGCCGCGATGCCGTCATCCTCCTCACGTGCGCGATCCACCCAGAGCTAATCTTTACCATCACCAA AATCTTGCTCGCCATACTCGGTCCACTCATGGTGCTCCAGGCTGGTATAACCAAAGTGCCGTACTTCGTG CGCGCACACGGGCTCATTCGTGCATGCATGCTGGTGCGGAAGGTTGCTGGGGGTCATTATGTCCAAATGG CTCTCATGAAGTTGGCCGCACTGACAGGTACGTACGTTTATGACCATCTCACCCCACTGCGGGACTGGGC CCACGCGGGCCTACGAGACCTTGCGGTGGCAGTTGAGCCCGTCGTCTTCTCTGATATGGAGACCAAGGTT ATCACCTGGGGGGCAGACACCGCGGCGTGTGGGGACATCATCTTGGGCCTGCCCGTCTCCGCCCGCAGGG GGAGGGAGATACATCTGGGACCGGCAGACAGCCTTGAAGGGCAGGGGTGGCGACTCCTCGCGCCTATTAC GGCCTACTCCCAACAGACGCGAGGCCTACTTGGCTGCATCATCACTAGCCTCACAGGCCGGGACAGGAAC CAGGTCGAGGGGGAGGTCCAAGTGGTCTCCACCGCAACACAATCTTTCCTGGCGACCTGCGTCAATGGCG TGTGTTGGACTGTCTATCATGGTGCCGGCTCAAAGACCCTTGCCGGCCCAAAGGGCCCAATCACCCAAAT GTACACCAATGTGGACCAGGACCTCGTCGGCTGGCAAGCGCCCCCCGGGGCGCGTTCCTTGACACCATGC ACCTGCGGCAGCTCGGACCTTTACTTGGTCACGAGGCATGCCGATGTCATTCCGGTGCGCCGGCGGGGCG ACAGCAGGGGGAGCCTACTCTCCCCCAGGCCCGTCTCCTACTTGAAGGGCTCTTCGGGCGGTCCACTGCT CTGCCCCTCGGGGCACGCTGTGGGCATCTTTCGGGCTGCCGTGTGCACCCGAGGGGTTGCGAAGGCGGTG GACTTTGTACCCGTCGAGTCTATGGAAACCACTATGCGGTCCCCGGTCTTCACGGACAACTCGTCCCCTC CGGCCGTACCGCAGACATTCCAGGTGGCCCATCTACACGCCCCTACTGGTAGCGGCAAGAGCACTAAGGT GCCGGCTGCGTATGCAGCCCAAGGGTATAAGGTGCTTGTCCTGAACCCGTCCGTCGCCGCCACCCTAGGT TTCGGGGCGTATATGTCTAAGGCACATGGTATCGACCCTAACATCAGAACCGGGGTAAGGACCATCACCA CGGGTGCCCCCATCACGTACTCCACCTATGGCAAGTTTCTTGCCGACGGTGGTTGCTCTGGGGGCGCCTA TGACATCATAATATGTGATGAGTGCCACTCAACTGACTCGACCACTATCCTGGGCATCGGCACAGTCCTG GACCAAGCGGAGACGGCTGGAGCGCGACTCGTCGTGCTCGCCACCGCTACGCCTCCGGGATCGGTCACCG TGCCACATCCAAACATCGAGGAGGTGGCTCTGTCCAGCACTGGAGAAATCCCCTTTTATGGCAAAGCCAT CCCCATCGAGACCATCAAGGGGGGGAGGCACCTCATTTTCTGCCATTCCAAGAAGAAATGTGATGAGCTC GCCGCGAAGCTGTCCGGCCTCGGACTCAATGCTGTAGCATATTACCGGGGCCTTGATGTATCCGTCATAC CAACTAGCGGAGACGTCATTGTCGTAGCAACGGACGCTCTAATGACGGGCTTTACCGGCGATTTCGACTC AGTGATCGACTGCAATACATGTGTCACCCAGACAGTCGACTTCAGCCTGGACCCGACCTTCACCATTGAG ACGACGACCGTGCCACAAGACGCGGTGTCACGCTCGCAGCGGCGAGGCAGGACTGGTAGGGGCAGGATGG GCATTTACAGGTTTGTGACTCCAGGAGAACGGCCCTCGGGCATGTTCGATTCCTCGGTTCTGTGCGAGTG CTATGACGCGGGCTGTGCTTGGTACGAGCTCACGCCCGCCGAGACCTCAGTTAGGTTGCGGGCTTACCTA AACACACCAGGGTTGCCCGTCTGCCAGGACCATCTGGAGTTCTGGGAGAGCGTCTTTACAGGCCTCACCC ACATAGACGCCCATTTCTTGTCCCAGACTAAGCAGGCAGGAGACAACTTCCCCTACCTGGTAGCATACCA GGCTACGGTGTGCGCCAGGGCTCAGGCTCCACCTCCATCGTGGGACCAAATGTGGAAGTGTCTCATACGG CTAAAGCCTACGCTGCACGGGCCAACGCCCCTGCTGTATAGGCTGGGAGCCGTTCAAAACGAGGTTACTA CCACACACCCCATAACCAAATACATCATGGCATGCATGTCGGCTGACCTGGAGGTCGTCACGAGCACCTG GGTGCTGGTAGGCGGAGTCCTAGCAGCTCTGGCCGCGTATTGCCTGACAACAGGCAGCGTGGTCATTGTG GGCAGGATCATCTTGTCCGGAAAGCCGGCCATCATTCCCGACAGGGAAGTCCTTTACCGGGAGTTCGATG AGATGGAAGAGTGCGCCTCACACCTCCCTTACATCGAACAGGGAATGCAGCTCGCCGAACAATTCAAACA GAAGGCAATCGGGTTGCTGCAAACAGCCACCAAGCAAGCGGAGGCTGCTGCTCCCGTGGTGGAATCCAAG TGGCGGACCCTCGAAGCCTTCTGGGCGAAGCATATGTGGAATTTCATCAGCGGGATACAATATTTAGCAG GCTTGTCCACTCTGCCTGGCAACCCCGCGATAGCATCACTGATGGCATTCACAGCCTCTATCACCAGCCC GCTCACCACCCAACATACCCTCCTGTTTAACATCCTGGGGGGATGGGTGGCCGCCCAACTTGCTCCTCCC AGCGCTGCTTCTGCTTTCGTAGGCGCCGGCATCGCTGGAGCGGCTGTTGGCAGCATAGGCCTTGGGAAGG TGCTTGTGGATATTTTGGCAGGTTATGGAGCAGGGGTGGCAGGCGCGCTCGTGGCCTTTAAGGTCATGAG CGGCGAGATGCCCTCCACCGAGGACCTGGTTAACCTACTCCCTGCTATCCTCTCCCCTGGCGCCCTAGTC GTCGGGGTCGTGTGCGCAGCGATACTGCGTCGGCACGTGGGCCCAGGGGAGGGGGCTGTGCAGTGGATGA ACCGGCTGATAGCGTTCGCTTCGCGGGGTAACCACGTCTCCCCCACGCACTATGTGCCTGAGAGCGACGC TGCAGCACGTGTCACTCAGATCCTCTCTAGTCTTACCATCACTCAGCTGCTGAAGAGGCTTCACCAGTGG ATCAACGAGGACTGCTCCACGCCATGCTCCGGCTCGTGGCTAAGAGATGTTTGGGATTGGATATGCACGG TGTTGACTGATTTCAAGACCTGGCTCCAGTCCAAGCTCCTGCCGCGATTGCCGGGAGTCCCCTTCTTCTC ATGTCAACGTGGGTACAAGGGAGTCTGGCGGGGCGACGGCATCATGCAAACCACCTGCCCATGTGGAGCA CAGATCACCGGACATGTGAAAAACGGTTCCATGAGGATCGTGGGGCCTAGGACCTGTAGTAACACGTGGC ATGGAACATTCCCCATTAACGCGTACACCACGGGCCCCTGCACGCCCTCCCCGGCGCCAAATTATTCTAG GGCGCTGTGGCGGGTGGCTGCTGAGGAGTACGTGGAGGTTACGCGGGTGGGGGATTTCCACTACGTGACG GGCATGACCACTGACAACGTAAAGTGCCCGTGTCAGGTTCCGGCCCCCGAATTCTTCACAGAAGTGGATG GGGTGCGGTTGCACAGGTACGCTCCAGCGTGCAAACCCCTCCTACGGGAGGAGGTCACATTCCTGGTCGG GCTCAATCAATACCTGGTTGGGTCACAGCTCCCATGCGAGCCCGAACCGGACGTAGCAGTGCTCACTTCC ATGCTCACCGACCCCTCCCACATTACGGCGGAGACGGCTAAGCGTAGGCTGGCCAGGGGATCTCCCCCCT CCTTGGCCAGCTCATCAGCTAGCCAGCTGTCTGCGCCTTCCTTGAAGGCAACATGCACTACCCGTCATGA CTCCCCGGACGCTGACCTCATCGAGGCCAACCTCCTGTGGCGGCAGGAGATGGGCGGGAACATCACCCGC GTGGAGTCAGAAAATAAGGTAGTAATTTTGGACTCTTTCGAGCCGCTCCAAGCGGAGGAGGATGAGAGGG AAGTATCCGTTCCGGCGGAGATCCTGCGGAGGTCCAGGAAATTCCCTCGAGCGATGCCCATATGGGCACG CCCGGATTACAACCCTCCACTGTTAGAGTCCTGGAAGGACCCGGACTACGTCCCTCCAGTGGTACACGGG TGTCCATTGCCGCCTGCCAAGGCCCCTCCGATACCACCTCCACGGAGGAAGAGGACGGTTGTCCTGTCAG AATCTACCGTGTCTTCTGCCTTGGCGGAGCTCGCCACAAAGACCTTCGGCAGCTCCGAATCGTCGGCCGT CGACAGCGGCACGGCAACGGCCTCTCCTGACCAGCCCTCCGACGACGGCGACGCGGGATCCGACGTTGAG TCGTACTCCTCCATGCCCCCCCTTGAGGGGGAGCCGGGGGATCCCGATCTCAGCGACGGGTCTTGGTCTA CCGTAAGCGAGGAGGCTAGTGAGGACGTCGTCTGCTGCTCGATGTCCTACACATGGACAGGCGCCCTGAT CACGCCATGCGCTGCGGAGGAAACCAAGCTGCCCATCAATGCACTGAGCAACTCTTTGCTCCGTCACCAC AACTTGGTCTATGCTACAACATCTCGCAGCGCAAGCCTGCGGCAGAAGAAGGTCACCTTTGACAGACTGC AGGTCCTGGACGACCACTACCGGGACGTGCTCAAGGAGATGAAGGCGAAGGCGTCCACAGTTAAGGCTAA ACTTCTATCCGTGGAGGAAGCCTGTAAGCTGACGCCCCCACATTCGGCCAGATCTAAATTTGGCTATGGG GCAAAGGACGTCCGGAACCTATCCAGCAAGGCCGTTAACCACATCCGCTCCGTGTGGAAGGACTTGCTGG AAGACACTGAGACACCAATTGACACCACCATCATGGCAAAAAATGAGGTTTTCTGCGTCCAACCAGAGAA GGGGGGCCGCAAGCCAGCTCGCCTTATCGTATTCCCAGATTTGGGGGTTCGTGTGTGCGAGAAAATGGCC CTTTACGATGTGGTCTCCACCCTCCCTCAGGCCGTGATGGGCTCTTCATACGGATTCCAATACTCTCCTG GACAGCGGGTCGAGTTCCTGGTGAATGCCTGGAAAGCGAAGAAATGCCCTATGGGCTTCGCATATGACAC CCGCTGTTTTGACTCAACGGTCACTGAGAATGACATCCGTGTTGAGGAGTCAATCTACCAATGTTGTGAC TTGGCCCCCGAAGCCAGACAGGCCATAAGGTCGCTCACAGAGCGGCTTTACATCGGGGGCCCCCTGACTA ATTCTAAAGGGCAGAACTGCGGCTATCGCCGGTGCCGCGCGAGCGGTGTACTGACGACCAGCTGCGGTAA TACCCTCACATGTTACTTGAAGGCCGCTGCGGCCTGTCGAGCTGCGAAGCTCCAGGACTGCACGATGCTC GTATGCGGAGACGACCTTGTCGTTATCTGTGAAAGCGCGGGGACCCAAGAGGACGAGGCGAGCCTACGGG CCTTCACGGAGGCTATGACTAGATACTCTGCCCCCCCTGGGGACCCGCCCAAACCAGAATACGACTTGGA GTTGATAACATCATGCTCCTCCAATGTGTCAGTCGCGCACGATGCATCTGGCAAAAGGGTGTACTATCTC ACCCGTGACCCCACCACCCCCCTTGCGCGGGCTGCGTGGGAGACAGCTAGACACACTCCAGTCAATTCCT GGCTAGGCAACATCATCATGTATGCGCCCACCTTGTGGGCAAGGATGATCCTGATGACTCATTTCTTCTC CATCCTTCTAGCTCAGGAACAACTTGAAAAAGCCCTAGATTGTCAGATCTACGGGGCCTGTTACTCCATT GAGCCACTTGACCTACCTCAGATCATTCAACGACTCCATGGCCTTAGCGCATTTTCACTCCATAGTTACT CTCCAGGTGAGATCAATAGGGTGGCTTCATGCCTCAGGAAACTTGGGGTACCGCCCTTGCGAGTCTGGAG ACATCGGGCCAGAAGTGTCCGCGCTAGGCTACTGTCCCAGGGGGGGAGGGCTGCCACTTGTGGCAAGTAC CTCTTCAACTGGGCAGTAAGGACCAAGCTCAAACTCACTCCAATCCCGGCTGCGTCCCAGTTGGATTTAT CCAGCTGGTTCGTTGCTGGTTACAGCGGGGGAGACATATATCACAGCCTGTCTCGTGCCCGACCCCGCTG GTTCATGTGGTGCCTACTCCTACTTTCTGTAGGGGTAGGCATCTATCTACTCCCCAACCGATGAACGGGG AGCTAAACACTCCAGGCCAATAGGCCATCCTGTTTTTTTCCCTTTTTTTTTTTCTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTCTCCTTTTTTTTTCCTCTTTTTTTCCTTTTCTTTCCTTTGGTGGCTCCATCT TAGCCCTAGTCACGGCTAGCTGTGAAAGGTCCGTGAGCCGCTTGACTGCAGAGAGTGCTGATACTGGCCT CTCTGCAGATCAAGT