Mercurial > repos > bgruening > package_vienna_rna_2_1

changeset 1:749e64a16406 draft default tip

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Uploaded
author bgruening
date Fri, 16 May 2014 07:55:54 -0400
parents 9d5a8bae2e8a
children
files tool_dependencies.xml
diffstat 1 files changed, 5 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Dec 05 18:08:12 2013 -0500
+++ b/tool_dependencies.xml	Fri May 16 07:55:54 2014 -0400
@@ -1,11 +1,14 @@
 <?xml version="1.0"?>
 <tool_dependency>
+    <package name="perl" version="5.18.1">
+        <repository changeset_revision="8ee4936dfce3" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+    </package>
     <package name="vienna_rna" version="2.1.5">
         <install version="1.0">
             <actions>
                 <action type="download_by_url">http://www.tbi.univie.ac.at/~ronny/RNA/packages/source/ViennaRNA-2.1.5.tar.gz</action>
                 <action type="set_environment_for_install">
-                    <repository changeset_revision="ab58b9f990c5" name="package_perl_5_18" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="8ee4936dfce3" name="package_perl_5_18" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
                         <package name="perl" version="5.18.1" />
                     </repository>
                 </action>
@@ -15,6 +18,7 @@
                     <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable>
                     <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                     <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$INSTALL_DIR/include</environment_variable>
+                    <environment_variable action="set_to" name="ROOT_VIENNA_RNA_DIR">$INSTALL_DIR</environment_variable>
                 </action>
             </actions>
         </install>