# HG changeset patch
# User bgruening
# Date 1420729222 18000
# Node ID 5afc3065141267118a3ccc0f969047023ae5d0bb
# Parent  191967e6496bc686c8eb078b3c5fbe3153732b96
Uploaded

diff -r 191967e6496b -r 5afc30651412 tool_dependencies.xml
--- a/tool_dependencies.xml	Sun Jan 26 10:14:04 2014 -0500
+++ b/tool_dependencies.xml	Thu Jan 08 10:00:22 2015 -0500
@@ -1,24 +1,21 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="R_3_0_1" version="3.0.1">
-        <repository changeset_revision="1d5b86c2e93d" name="package_r_3_0_1" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+    <package name="R" version="3.1.2">
+        <repository changeset_revision="f0626dac6765" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="readline" version="6.2">
-        <repository changeset_revision="246f31787ca1" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="4e4f3dc94efa" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
-    <package name="rpy2" version="2.2.3.6">
+    <package name="rpy2_2_3_6" version="2.3.6">
         <install version="1.0">
             <actions>
                 <action type="download_by_url">https://pypi.python.org/packages/source/r/rpy2/rpy2-2.3.6.tar.gz</action>
                 <action type="set_environment_for_install">
-                    <repository changeset_revision="246f31787ca1" name="package_readline_6_2" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="4e4f3dc94efa" name="package_readline_6_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="readline" version="6.2" />
                     </repository>
-                    <repository changeset_revision="1d5b86c2e93d" name="package_r_3_0_1" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
-                        <package name="R_3_0_1" version="3.0.1" />
-                    </repository>
-                    <repository changeset_revision="f62fa47b852d" name="package_ncurses_5_9" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
-                        <package name="ncurses" version="5.9" />
+                    <repository changeset_revision="f0626dac6765" name="package_r_3_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="R" version="3.1.2" />
                     </repository>
                 </action>
 
@@ -32,7 +29,6 @@
                     <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
                     <environment_variable action="append_to" name="LD_LIBRARY_PATH">$ENV[READLINE_LIB_PATH]</environment_variable>
                     <environment_variable action="append_to" name="LD_LIBRARY_PATH">$ENV[RHOME]/lib</environment_variable>
-                    <environment_variable action="append_to" name="LD_LIBRARY_PATH">$ENV[NCURSES_LIB_PATH]/lib</environment_variable>
                 </action>
             </actions>
         </install>