# HG changeset patch
# User bgruening
# Date 1368817151 14400
# Node ID 22be3a20e7f3afd35675e8d129b912c640b5dd9f
# Parent  ec80bba4bccbe4c29853ee181bf88a9c959b8eb6
Uploaded

diff -r ec80bba4bccb -r 22be3a20e7f3 tool_dependencies.xml
--- a/tool_dependencies.xml	Sat May 11 16:06:57 2013 -0400
+++ b/tool_dependencies.xml	Fri May 17 14:59:11 2013 -0400
@@ -1,17 +1,36 @@
+<?xml version="1.0"?>
 <tool_dependency>
+        <package name="lapack" version="3.4.2">
+            <repository changeset_revision="11df6383f50a" name="package_lapack_3_4" owner="bgruening" prior_installation_required="True" />
+            </package>
+    <package name="atlas" version="3.10.1">
+            <repository changeset_revision="2574cc1efadb" name="package_atlas_3_10" owner="bgruening" prior_installation_required="True" />
+            </package>
     <package name="numpy" version="1.7.1">
-        <install version="1.0">
             <actions>
                 <action type="download_by_url">https://pypi.python.org/packages/source/n/numpy/numpy-1.7.1.tar.gz</action>
-                <action type="make_directory">$INSTALL_DIR/lib/python</action>
-                <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin</action>
+                <action type="set_environment_for_install">
+                    <repository changeset_revision="11df6383f50a" name="package_lapack_3_4" owner="bgruening">
+                        <package name="lapack" version="3.4.2" />
+                        </repository>
+                </action>
+            <action type="set_environment_for_install">
+                    <repository changeset_revision="2574cc1efadb" name="package_atlas_3_10" owner="bgruening">
+                        <package name="atlas" version="3.10.1" />
+                        </repository>
+                </action>
+            <action type="make_directory">$INSTALL_DIR/lib/python</action>
+                <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 
+                export BLAS=$LAPACK_LIB_DIR/libblas.a &amp;&amp; 
+                export LAPACK=$LAPACK_LIB_DIR/liblapack.a &amp;&amp; 
+                export ATLAS=$ATLAS_LIB_DIR/libatlas.a &amp;&amp; 
+                python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin</action>
                 <action type="set_environment">
-                    <environment_variable name="PYTHONPATH" action="append_to">$INSTALL_DIR/lib/python</environment_variable>
-                    <environment_variable name="PYTHONPATH_NUMPY" action="set_to">$INSTALL_DIR/lib/python</environment_variable>
-                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
-                </action>
+                    <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
+                    <environment_variable action="set_to" name="PYTHONPATH_NUMPY">$INSTALL_DIR/lib/python</environment_variable>
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
+                    </action>
             </actions>
-        </install>
         <readme>Compiling numpy requires a C and Fortran compiler (typically gcc and gfortran). The PYTHONPATH for numpy can be accessed through PYTHONPATH_NUMPY.</readme>
-    </package>
-</tool_dependency>
+            </package>
+    </tool_dependency>