# HG changeset patch
# User bgruening
# Date 1394055790 18000
# Node ID 303caf3c5b6440c32244e1b523ff1ce8d1de4a0f
# Parent  3b6a8c377895d960b22d333f4fc590dbba49cc27
Uploaded

diff -r 3b6a8c377895 -r 303caf3c5b64 tool_dependencies.xml
--- a/tool_dependencies.xml	Wed Oct 23 05:05:52 2013 -0400
+++ b/tool_dependencies.xml	Wed Mar 05 16:43:10 2014 -0500
@@ -1,7 +1,7 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <package name="R_3_0_1" version="3.0.1">
-        <repository changeset_revision="e16e08f41ed7" name="package_r_3_0_1" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="6d4995a918c5" name="package_r_3_0_1" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
     </package>
 
     <package name="deseq2" version="1.0.17">
@@ -9,10 +9,10 @@
             <actions>
                 <action type="setup_r_environment">
 
-                    <repository name="package_r_3_0_1" owner="iuc">
+                    <repository changeset_revision="6d4995a918c5" name="package_r_3_0_1" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
                         <package name="R_3_0_1" version="3.0.1" />
                     </repository>
-
+                    <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_2_10/getopt_1.20.0.tar.gz</package>
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_0_18/BiocGenerics_0.6.0.tar.gz</package>
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_0_18/IRanges_1.18.2.tar.gz</package>
                     <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_0_18/GenomicRanges_1.12.4.tar.gz</package>