# HG changeset patch
# User bgruening
# Date 1557250085 14400
# Node ID e41a468bc40dd13f56b8247c995fd5acafda2e62
# Parent  6cafe4f5d181410e641b03a7383715bc4a622aa8
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/chemicaltoolbox/osra commit ed9b6859de648aa5f7cde483732f5df20aaff90e

diff -r 6cafe4f5d181 -r e41a468bc40d osra.xml
--- a/osra.xml	Thu Nov 09 03:41:26 2017 -0500
+++ b/osra.xml	Tue May 07 13:28:05 2019 -0400
@@ -1,7 +1,8 @@
 <tool id="ctb_osra" name="Molecule recognition" version="2.1.0">
-    <description>in Images or PDF documents (OSRA)</description>
+    <description>in PDF documents (OSRA)</description>
     <requirements>
         <requirement type="package" version="2.1.0">osra</requirement>
+        <requirement type="package" version="0.52">poppler</requirement>
     </requirements>
     <command detect_errors="aggressive">
 <![CDATA[
@@ -44,6 +45,11 @@
             <param name="oformat" value="sdf"/>
             <output name="outfile" ftype="sdf" file="osra_on_CID2244.sdf"/>
         </test>
+        <!-- <test>
+            <param name="infile" value="CID_2244.png" ftype="png"/>
+            <param name="oformat" value="sdf"/>
+            <output name="outfile" ftype="sdf" file="osra_on_CID2244.sdf"/>
+        </test> -->
         <!--test>
             PNGs producing a core-dump in osra
             <param name="infile" value="2008001635_153_chem.png"/>
@@ -58,7 +64,7 @@
 
 **What this tool does**
 
-OSRA_ (Optical Structure Recognition Application) is a utility designed to convert graphical representations of chemical structures into SMILES or SDF. It generates the SMILES or SDF representation of any molecular structure image within a document which is parseable by GraphicMagick.
+OSRA_ (Optical Structure Recognition Application) is a utility designed to convert graphical representations of chemical structures, contained within a PDF file, into a SMILES or SDF representation.
 
 .. _OSRA: http://cactus.nci.nih.gov/osra/
 
diff -r 6cafe4f5d181 -r e41a468bc40d test-data/CID_2244.jpg
Binary file test-data/CID_2244.jpg has changed
diff -r 6cafe4f5d181 -r e41a468bc40d test-data/CID_2244.png
Binary file test-data/CID_2244.png has changed