view LabeledEval.xml @ 3:ec62782f6c68 draft

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<?xml version='1.0' encoding='UTF-8'?>
<tool id="LabeledEval" name="LabeledEval" version="1.12.0">
  <description> Evaluation tool for isotope-labeled quantitation experiments.</description>
  <macros>
    <token name="@EXECUTABLE@">LabeledEval</token>
    <import>macros.xml</import>
  </macros>
  <expand macro="stdio"/>
  <expand macro="requirements"/>
  <command>LabeledEval

-in ${param_in}
-truth ${param_truth}
-rt_tol ${param_rt_tol}
-mz_tol ${param_mz_tol}
-threads \${GALAXY_SLOTS:-24} 
</command>
  <inputs>
    <param name="param_in" type="data" format="featureXML" optional="False" label="Feature result file" help="(-in)"/>
    <param name="param_truth" type="data" format="consensusXML" optional="False" label="Expected result file." help="(-truth)"/>
    <param name="param_rt_tol" type="float" value="20.0" label="Maximum allowed retention time deviation" help="(-rt_tol)"/>
    <param name="param_mz_tol" type="float" value="0.25" label="Maximum allowed m/z deviation (divided by charge)" help="(-mz_tol)"/>
  </inputs>
  <outputs/>
  <help>**What it does**

 Evaluation tool for isotope-labeled quantitation experiments.


For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_LabeledEval.html

@REFERENCES@
</help>
</tool>