view IDConflictResolver.xml @ 1:17e8c91b70d5 draft

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<?xml version='1.0' encoding='UTF-8'?>
<tool id="IDConflictResolver" name="IDConflictResolver" version="1.12.0">
  <description>Resolves ambiguous annotations of features with peptide identifications</description>
  <macros>
    <token name="@EXECUTABLE@">IDConflictResolver</token>
    <import>macros.xml</import>
  </macros>
  <expand macro="stdio"/>
  <expand macro="requirements"/>
  <command>IDConflictResolver

-in ${param_in}
-out ${param_out}
-threads \${GALAXY_SLOTS:-24} 
</command>
  <inputs>
    <param name="param_in" type="data" format="featureXML,consensusXML" optional="False" label="Input file (data annotated with identifications)" help="(-in)"/>
  </inputs>
  <outputs>
    <data name="param_out" label="Output file (data with one peptide identification per feature)" format="consensusXML">
      <change_format>
        <when input="param_out_type" value="featureXML" format="featureXML"/>
      </change_format>
    </data>
  </outputs>
  <help>**What it does**

Resolves ambiguous annotations of features with peptide identifications


For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_IDConflictResolver.html

@REFERENCES@
</help>
</tool>