diff FuzzyDiff.xml @ 4:6ead64a594bd draft default tip

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/openms commit 7a5239910fda9ed90cca286a38855703b40b1b56-dirty

--- a/FuzzyDiff.xml	Mon Oct 13 10:18:22 2014 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,46 +0,0 @@
-<?xml version='1.0' encoding='UTF-8'?>
-<tool id="FuzzyDiff" name="FuzzyDiff" version="1.12.0">
-  <description>Compares two files, tolerating numeric differences.</description>
-  <macros>
-    <token name="@EXECUTABLE@">FuzzyDiff</token>
-    <import>macros.xml</import>
-  </macros>
-  <expand macro="stdio"/>
-  <expand macro="requirements"/>
-  <command>FuzzyDiff
-
--in1 ${param_in1}
--in2 ${param_in2}
--ratio ${param_ratio}
--absdiff ${param_absdiff}
--verbose ${param_verbose}
--tab_width ${param_tab_width}
--first_column ${param_first_column}
--threads \${GALAXY_SLOTS:-24} 
-#if $adv_opts.adv_opts_selector=='advanced':
-    -whitelist ${adv_opts.param_whitelist}
-#end if
-</command>
-  <inputs>
-    <param name="param_in1" type="data" format="data" label="first input file" help="(-in1)"/>
-    <param name="param_in2" type="data" format="data" label="second input file" help="(-in2)"/>
-    <param name="param_ratio" type="float" min="1.0" optional="True" value="1.0" label="acceptable relative error. Only one of 'ratio' or 'absdiff' has to be satisfied.  Use &quot;absdiff&quot; to deal with cases like &quot;zero vs. epsilon&quot;." help="(-ratio)"/>
-    <param name="param_absdiff" type="float" min="0.0" optional="True" value="0.0" label="acceptable absolute difference. Only one of 'ratio' or 'absdiff' has to be satisfied. " help="(-absdiff)"/>
-    <param name="param_verbose" type="integer" min="0" max="3" optional="True" value="2" label="set verbose level:#br#0 = very quiet mode (absolutely no output)#br#1 = quiet mode (no output unless differences detected)#br#2 = default (include summary at end)#br#3 = continue after errors#br#" help="(-verbose)"/>
-    <param name="param_tab_width" type="integer" min="1" optional="True" value="8" label="tabulator width, used for calculation of column numbers" help="(-tab_width)"/>
-    <param name="param_first_column" type="integer" min="0" optional="True" value="1" label="number of first column, used for calculation of column numbers" help="(-first_column)"/>
-    <expand macro="advanced_options">
-      <param name="param_whitelist" type="text" size="20" value="&lt;?xml-stylesheet" label="Lines containing one of these strings are skipped" help="(-whitelist)"/>
-    </expand>
-  </inputs>
-  <outputs/>
-  <help>**What it does**
-
-Compares two files, tolerating numeric differences.
-
-
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_FuzzyDiff.html
-
-@REFERENCES@
-</help>
-</tool>