diff ConvertTraMLToTSV.xml @ 0:3d84209d3178 draft

Uploaded

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/ConvertTraMLToTSV.xml	Fri Oct 10 18:20:03 2014 -0400
@@ -0,0 +1,31 @@
+<?xml version='1.0' encoding='UTF-8'?>
+<tool id="ConvertTraMLToTSV" name="ConvertTraMLToTSV" version="1.12.0">
+  <description>Converts a TraML file to an OpenSWATH transition TSV file</description>
+  <macros>
+    <token name="@EXECUTABLE@">ConvertTraMLToTSV</token>
+    <import>macros.xml</import>
+  </macros>
+  <expand macro="stdio"/>
+  <expand macro="requirements"/>
+  <command>ConvertTraMLToTSV
+
+-in ${param_in}
+-out ${param_out}
+-threads \${GALAXY_SLOTS:-24} 
+</command>
+  <inputs>
+    <param name="param_in" type="data" format="" optional="False" label="Input TraML file" help="(-in)"/>
+  </inputs>
+  <outputs>
+    <data name="param_out" label="Output OpenSWATH transition TSV file" format="tabular"/>
+  </outputs>
+  <help>**What it does**
+
+Converts a TraML file to an OpenSWATH transition TSV file
+
+
+For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_ConvertTraMLToTSV.html
+
+@REFERENCES@
+</help>
+</tool>