# HG changeset patch # User bgruening # Date 1495324790 14400 # Node ID 129c899f1a1bea9e762cbc57f18f5f3080e9b975 # Parent 02250f7925307baa357d6794fe1586b66adcc531 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/chemicaltoolbox/openbabel commit c376ab981fafb25f0c04a2a313968fa2e55f5196 diff -r 02250f792530 -r 129c899f1a1b __pycache__/cheminfolib.cpython-36.pyc Binary file __pycache__/cheminfolib.cpython-36.pyc has changed diff -r 02250f792530 -r 129c899f1a1b ob_spectrophore_search.py --- a/ob_spectrophore_search.py Sat May 20 19:57:52 2017 -0400 +++ b/ob_spectrophore_search.py Sat May 20 19:59:50 2017 -0400 @@ -57,7 +57,7 @@ # This sets up the parameters for the Spectrophore generation. Parameters are set to fit those of our standard parsing tool set_parameters(args) - mol = pybel.readfile('sdf', args.target).next() + mol = next(pybel.readfile('sdf', args.target)) target_spectrophore = mol.data["Spectrophores(TM)"].strip().split(', ') # Compute the paired-distance between every molecule in the library and the target distances = Compute_Spectrophores_distance(target_spectrophore, args)