Mercurial > repos > bgruening > nanopolish_variants

diff nanopolish_variants.xml @ 6:733fd70178bd draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 25c22b467760e4784e199125292927bd2274a189
author bgruening
date Sun, 23 Jun 2019 04:42:20 -0400
parents ad4693b6f1a7
children ff74028ec7b9
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--- a/nanopolish_variants.xml	Tue Jun 18 12:33:44 2019 -0400
+++ b/nanopolish_variants.xml	Sun Jun 23 04:42:20 2019 -0400
@@ -1,4 +1,4 @@
-<tool id="nanopolish_variants" name="Nanopolish variants" version="0.1.0">
+<tool id="nanopolish_variants" name="Nanopolish variants" version="0.11.1">
     <description>- Find SNPs of basecalled merged Nanopore reads and polishes the consensus sequences</description>
     <macros>
         <import>macros.xml</import>
@@ -98,7 +98,7 @@
     <inputs>
       <!-- index inputs -->
         <param type="data" name="input_merged" format="fasta,fastq" label="Basecalled merged reads.fa"/>
-        <param type="data" name="input_reads_raw" format="h5,fast5.tar.gz,fast5.tar.bz2,fast5.tar" label="Flat archive file of raw fast5 files"/>
+        <param type="data" name="input_reads_raw" format="fast5.tar.gz,fast5.tar.bz2,fast5.tar" label="Flat archive file of raw fast5 files"/>
 
         <!-- variants consensus inputs -->
         <param type="data" argument="-b" format="bam" label="Reads aligned to the reference genome" />