diff cmbuild.xml @ 11:5c6344f67ad0 draft

Uploaded
author bgruening
date Sun, 08 Sep 2013 06:48:18 -0400
parents 0bffd4183326
children c17ed5a530d2
line wrap: on
line diff
--- a/cmbuild.xml	Sun Sep 08 05:08:20 2013 -0400
+++ b/cmbuild.xml	Sun Sep 08 06:48:18 2013 -0400
@@ -28,14 +28,14 @@
             #end if
 
             $effective_opts.effective_opts_selector
-            #if $effective_opts.effective_opts_selector == '--eent':
+            #if str($effective_opts.effective_opts_selector) == '--eent':
                 --ere $effective_opts.ere
                 --eminseq $effective_opts.eminseq
                 --ehmmre $effective_opts.ehmmre
                 --eset $effective_opts.eset
             #end if
 
-            #if $refining_opts.refining_opts_selector == '--refine':
+            #if str($refining_opts.refining_opts_selector) == '--refine':
                 #if $refining_opts.refine_output:
                     --refine $refined_multiple_alignment_output
                 #else:
@@ -45,7 +45,7 @@
                 $l
                 $refining_opts.gibbs_opts.gibbs_opts_selector
 
-                #if $refining_opts.gibbs_opts.gibbs_opts_selector == '--gibbs':
+                #if str($refining_opts.gibbs_opts.gibbs_opts_selector) == '--gibbs':
                     $refining_opts.gibbs_opts.random_seed
                 #end if